Pseudomonas taiwanensis DSM 21245, H620_RS0113345
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas taiwanensis DSM 21245 H620DRAFT_scaffold00021.21_C, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CCAGCGCCGACTGGCCGCCGAGGCGGATGAAGAGCTGGCGCGTCTGACCGCGCTCAAGGCCGTCAATCCAAGCGTGCGTGACAGCGAAATCGACGCCCTG CGCAAGCAGCGTGAAGAAGGCTTGGCAATGCTGGATAAGGCAGCCTTGCGACTGGAGGCGATTCGAGTGCTGGTCGCAGGCTGATTATCCGCCGGCTCTG TGGGAGCCTCTTGCTGTCGAGACGGGCCGCGCTCCGCTGCGCGGGAAGCCTGGGGGGCCGCGATGCGGCCCTATCGCGACGCAAGACCGCCCCCACAGCG ATCCGCTACCACATGGGTAAGTCCCGCAAGTTTTCGTTCGCGAGGTCGTTATATCCCTCCGCTATCAGCCCGATGCCGAAATCATTGCTTTCAAAGTGCC ATTAGTCATGAAGGCCTGAATAGCTGTTCCTATACTTTCCTCTGGTCAGTCTCCACCCCGCATTTTGGAGACGAGTGAAAACTCGACGAAGAGGCATGCT
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| DNA Sequence for Gene |
>H620_RS0113345
ATGGAATGGCTGGGACTGCAATTGTTCTCCGAGCTTCCTATCAACGGGCAGATTGTCATTGACTGCCGGCATGAGCCGCTACTGATCCTGCTCGCTTATG CCGTGGCCTGTGCCGGGTGTTTCGCCACCCTGGACATGGCAGAACGCCAATGTCACTGCGAAAATGCCAAAGCCCAACGACAATGGCGGGCACTTGGCGC CTTCTGCCTGGCCGGCGGTATCTGGGCCATGCACTTCATCAGCATGCTCGCCTTCCAGGCACCGCTGGAAGTCCACTATGACGTCTCTCTTACCGGCCTT TCGCTCTTGATTGCATTGGTGGTTGCCTGGCTGGCGATGTACAGCCTCAACCGTGTACAAATGCTTGCGCACAACTATTTGCAAAGCGCCCTGCTCATTG GCGCGGGCATCATCCTCATGCACTTCGTCGGCATGGCTGCGCTGCAGACCGGCGCCCAGCAGTATTACCGTACCGACCTGTTGCTGGCCTGTACCGCCAT CGCCTTTCTCACCAGCCTCACCGCCCTGCTGCTGGCGCGGTACTTCCGCAACGGTAGCGGCACTTGGCATTTGGCCATGAAATACGGCGCCAGCCTGGTC ATGGCGGGCGGTATCGTCGCCACGCATTTCACCGCCATGGCCGCGATGACCTTGGTCATACCAGCCGACACGGCCTTGAGCTTGCCTTCGGGTGATAACA GCCTGCAACTGGGCCTGACCATCGCCGTGATCACCTTGCTGATCAGTGGCAGCAGCATCAGCGCCGCGCTGGCCGACAAGAAGCTGCAACGTCAGGAACA CGACCTGCGCCGCTACAGCGTCCTGCTCAACCAGCTCGATCAGGCCCGCGCCTCCCTGCAGCAAGCCGCTCACTACGATGCCTTGACCAATCTGGTCAAC CGCCGAGGTTTCAACGAAGTGTTCGCCGAACGCCTGGCCGAGCATCAGGACCGCCAGAGTCGCCTGGCGGTGATGTTCCTCGACATCGACCATTTCAAGC GCATCAATGACAGCCTTGGTCACGATGCGGGCGATGAGCTACTGAAGGTCATCGCCGACCATATCAAGGCCGCCACCCGCAGTCAGGACCTGGTGGCACG GCTGGGGGGCGACGAGTTCTGCGTGGTCACCAGCCTGAACAACCCCGATGAGGCTCGCCACCTGGCCCAACGCATCATGCAACGCATGAAAGACCCCATC GACCTGGGCGGCCGGCGCATGGTGATGACCACCAGTATTGGCATCAGCATATTCCCGGAAGATGGCCAAACCGCTGAAGAACTGCTCAAGCATGCCGACC TGGCCCTTTATCAATCCAAGGGCTGCGGACGCAATAGCCTGCACTTCTTCAACAGCGGACTGAAGAACCGGGCGACCCTTGAACTGCAACTGGAAGAGGA ACTGCGCATCGCCCTGCTCGAGGAGTGCGGACTGTGCGTGCATTACCAGCCCATCTTCGACCTGCGCACGGGCCAGGTGGCCAAACTCGAAGCGCTGGTA CGCTGGCAACACCCGCAACACGGCCTGCTAAGCCCCGATCGTTTCATCGGCATCGCCGAAGCCAACGGGCTGATCGTCGACCTTGACCTGTGGGTGCTGC ACCACGCCTGCAAGGACCTGGCCCAGCTCAACCGCCACGGCTACACCAGCCTGAAGGTTACGGTGAACTGTTCGGCCGTGACCCTAGGCCGCGAAGAGCT GGCCAATGAGGTAGAAATGGCCTTGCTGGAAGCTGGGCTTGCGCCGCGCCAACTGGAACTCGAGGTGACCGAAAATGCCCTGATGGGTGATGTCCAGCGC ACTGCAGGGCTTTTCAAGCGTATCCGCGCCCAGGGCGTTGCCCTGTCGATCGATGACTTCGGCACCGGCTATTCGTCGCTGGCTTACCTCAAGCGCTTGC CGCTGGATGTGCTGAAGATCGACCGCAGTTTTCTCCAGGACGTGCCCGGCAACCAGAAGGACCGGGAAATCGTCCAGGCGATCATCGTCATGGCCCACAC CCTCCACCTGCAGGTGGTCTGCGAGGGTGTCGAGACCATCGAACAACACGAATTCCTCGCCACCCACGGCTGCGACTACCTGCAAGGGTACCTGCTGAGC CGACCAGTGCCGCTGGCGGACCTGCGGCCGATCCTGGAGCGGCTCGACCGCCAGGAAAGCCGCCTCACTCCTTGTTACGATACAGTTCTACCAGGGTCGC CGGATCTTTTTGCAGATTCCCTTGGCTACCGTGCAAGCGCATCAGTTGCGCGGCGAGGGCGGTAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
CGGGTGTTGCCGAGCCCTGCTCGCGGGAAAACTTGACGGCGCCATCGAGGTCCTTGAGCAGCGTGCGCACATGCCACTTGATCGGTTCGAAGCGGCTTTC GGCCATTTGCGGCGCCAGGATCTGCAGGGGCTTGGAGTCGGCGAAGCCCCCTGCCAGCGCTTCGGCGATCAAGGTCGCGTCAACCCCTGACCGCTCCGCC AGGGCCACCACTTCGGCAATCACCAAGGCATTGCACGCCACGATCATCTGATTGCAGGCCTTGGTTACCTGCCCCGCTCCCACTGCCCCCATGTGCGTGA CTCGCTGGCCCAGGGTCAGCAGAATGGGTCGAGCGCGCTCAAGATCACTCGGCTCCCCGCCGACCATGATCGCCAGGGTCCCCGCTTCCGCGCCAGGCGT CCCCCCCGATACCGGCGCATCCAGCCAGGCCATGCCACACAGGGCGGCCACTTCAGCAGCCATTTCGCGAGTGGCCGTCGGTTCAAGACTGGAGAAGTCG
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| Amino Acid Sequence |
>diguanylate phosphodiesterase
MEWLGLQLFSELPINGQIVIDCRHEPLLILLAYAVACAGCFATLDMAERQCHCENAKAQRQWRALGAFCLAGGIWAMHFISMLAFQAPLEVHYDVSLTGL SLLIALVVAWLAMYSLNRVQMLAHNYLQSALLIGAGIILMHFVGMAALQTGAQQYYRTDLLLACTAIAFLTSLTALLLARYFRNGSGTWHLAMKYGASLV MAGGIVATHFTAMAAMTLVIPADTALSLPSGDNSLQLGLTIAVITLLISGSSISAALADKKLQRQEHDLRRYSVLLNQLDQARASLQQAAHYDALTNLVN RRGFNEVFAERLAEHQDRQSRLAVMFLDIDHFKRINDSLGHDAGDELLKVIADHIKAATRSQDLVARLGGDEFCVVTSLNNPDEARHLAQRIMQRMKDPI DLGGRRMVMTTSIGISIFPEDGQTAEELLKHADLALYQSKGCGRNSLHFFNSGLKNRATLELQLEEELRIALLEECGLCVHYQPIFDLRTGQVAKLEALV RWQHPQHGLLSPDRFIGIAEANGLIVDLDLWVLHHACKDLAQLNRHGYTSLKVTVNCSAVTLGREELANEVEMALLEAGLAPRQLELEVTENALMGDVQR TAGLFKRIRAQGVALSIDDFGTGYSSLAYLKRLPLDVLKIDRSFLQDVPGNQKDREIVQAIIVMAHTLHLQVVCEGVETIEQHEFLATHGCDYLQGYLLS RPVPLADLRPILERLDRQESRLTPCYDTVLPGSPDLFADSLGYRASASVARRGR
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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