Strain | Pseudomonas taiwanensis DSM 21245 H620DRAFT_scaffold00021.21_C, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
GAACGGAAAGGCGACGAGGAACCAGGTGTACAGGGTTTGACTGTCCTCGCTGAGGAAGGGCAGGGTGGCCAGCGCGGAGGCTTCGATGATGCCCGCGAAG ACAGCGATTATGGTCAGCGGCGCGACAGGTTGAGCGTTGGGCATGAGGGTGGTCTCCTGCTGTTTTCTTCTCAATACCGCACTAAGTCAATCAACTAAAG AGTGGGGCTTTCCACGCTTGAAGCCACCTGCCGTTCAACCTGACGACGATAAGTTTTCGCTTGCATCCGCGCAGCGAAGTTTCACTCAAGTCGTGCGGAT AGTTTCAACTGTTCAATTCCGAAGCAGCGCAGGTAATTTGTGATACGAAGAAGTTGAGTGAAAGTACAACCAACTTGTAGGAAATTTCTCCAATTGCTGT AAGTTCCATCTATTCGCGTATTCGAGCGGAAAATCGTAACGCAAGAGTTGTTCTGCTCGGTTATCTTGGCGCGTCAACGAAAATAATGAATGGATTTCGC
|
|
DNA Sequence for Gene |
>H620_RS0113130
ATGAATAAAGTGCTTATCGTGGATGACCATCCGGTCATACGTTTGGCCGTACGCATGCTGATGGAGCGGCACGGCTACGATGTGGTCGCCGAAACCGATA ACGGCGTGGCCGCCTTGCAACTGACGCGAGAACACCTACCGGACATCGTGGTGCTGGATATCGGTATCCCGAAACTCGATGGGCTCGAGGTGATCGCCCG CATGGCCTCGGCCAGTCCGGGAAGCCGAGTTCTGGTGCTGACCTCACAGACACCAGGCCACTTCTCGATGCGTTGCATGCAGGCGGGGGCTTCGGGGTAC GTGTGCAAACAGCAGGAGCTCACCGAGTTGCTCAGTGCGATCAAGGCCGTGCTGTCGGGTTACAGTTATTTCCCGAACCAAGCGTTGCACCCGTCGCGAG GAAGGGGAGGCGGCGCGACCGAGAGCGAAATGGTCGAGCGTTTATCCGCCCGGGAAATGATGGTGCTGCAGCAACTGACACGCGGCAAGTCAAACAAGGA GATTGCCGAAAGCATGTTCCTCAGCAACAAGACGGTCAGTACCTACAAGACTCGATTGTTGCTCAAGCTCAATGCCCGGTCGTTGGTTGACCTGATCGAG CTTGCCCAACGGCATGGCTTGACCTGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
DNA Sequence Downstream of Gene |
GTGCCATGAAGCGGAAGGCCTCCACCAGGGAGGCCTTCCGGGGGACTACAGGTCGTAGTCGAAATCGGCCAACTGCTTTTGCAGGCGTCGCTCTTCCAGC AGGTTGTCAATGGTGCGGCGTTTGCTCAGGTTGGTCTTCGCGGTTTCTACCTGAGGTTCCGCTTCGTCGTCGGCGGTAGCAAATTCATCTTCGATGGACA GGTCGTCGTCTTTATCGGTGCTCATTGAGTCGCTCCAAGCCAAAGGGCCATTGGCGGTCCTTATAACGAGAAAGCTGAGCCCGGTAAAAAAGATTTTTTC AATCGTCAGCCCCCGTTTTTTGCTATCGACTCAATCGTCCGAAGTCTTGTGCTTGTACTCGCAAAGGTCTTCGATCCGACAGCTTCCGCAACGCGGCTTG CGCGCCTGACACACATAGCGCCCATGCAGAATGAGCCAGTGGTGGGCATCGAGCAGGTAATCCTTGGGCACGAACTTGATCAGTTTCTTTTCCACTTCCA
|
|
Amino Acid Sequence |
>LuxR family transcriptional regulator
MNKVLIVDDHPVIRLAVRMLMERHGYDVVAETDNGVAALQLTREHLPDIVVLDIGIPKLDGLEVIARMASASPGSRVLVLTSQTPGHFSMRCMQAGASGY VCKQQELTELLSAIKAVLSGYSYFPNQALHPSRGRGGGATESEMVERLSAREMMVLQQLTRGKSNKEIAESMFLSNKTVSTYKTRLLLKLNARSLVDLIE LAQRHGLT
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|