Pseudomonas taiwanensis DSM 21245, H620_RS0112700
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas taiwanensis DSM 21245 H620DRAFT_scaffold00020.20_C, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GTGCAAGGGATCGACCCGCAGAGTGGCAGCACCGGGCTTGGTCTTTACTTCGCGGCCAGGATTGCGGCACTGCATGAACGCAATGGCGTACGCGGACGGA TCGAGATTGCCAATGGCGGGGCGCTTGGCGGTGGGTTGTTCCGGTTGTATTTGCCTTGAGGCTGGTGGTGAATTGCGTTGAGGGTATTGGCGTACGCATG TATTTTTAGCGCCTATGAATGCGAACGCCGCCCGCGGGGCGAATCGCGAGCAAGGCTCGCTCCTACGTTTTTTTGGCCAGGAACACCAGTGGCAGACGCG CGCGACCGCCTTGTTCGTAAGACTCGGTTTCGCGCCGTGCACCAAAGCGGTCGCGCGCAAATCCCGTAGCCATGACTGGCCCGAAACAAACGTAGGAGCG AGCCTTGCTCGCGATTCGCCGCGCGGGCGGCGCTCGATCTGCGCCTCACTACAGAACTGATGGTAGGCTCTCGTCTGAATCGCCCCAAACATACTCGGAC
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| DNA Sequence for Gene |
>H620_RS0112700
ATGCCCGGTAGCCAGATGCCCCCGCAAACCACCCTCATCCGCGAAACGTTCCCCGTCGGCCCCCTGCAGTGCAACTGCACGCTGATCGGCGACCCTGTCA GCAAAAAAGCCATCGTGGTCGATCCCGGGGGTGACCCGGACAAGATTCTCGCCCGCCTGCAGGCCCATGGCCTGACCTTGGTGAGCATCATTCACACCCA CGCGCACTTCGACCATTTCCTTGCCTCAGGCAAGCTCAAGGAGTTGACTGGCGCCACCCTGCATCTGCACAAGGATGACCAGCCGCTGTGGGACAACCTG GAAATGCAGTGCCAGATGTTCGGGGTGCCCTACACGCCGGTGCCTTCGCCAGACCGCTGGCTTGGGGACGACGAGGAACTGGCCTGCGGTTGTGGCGTGG CGTTGCACACCCCGGGACACACGCCGGGTTCGATGAGCTTCTGGTTCGCCGAGGCCAAGCTGTTGGTAGCCGGTGACACCCTGTTCCGCCGTGGAATTGG CCGCACCGATTTGTGGGGTGGCGATCAGCGGGCCATCGTGCGCTCTATCAAGGAACGGTTGTATCGCCTGGATGAAGAGGCCATCGTGGTGACTGGCCAC GGCCCTGACACACGCCTGGGCGACGAAATGCGCGAGAACCCTTTCGTGCGGGCGTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GCCATCATGAAAAGCCTTTCATGGAATTTTTCCGTAAATTACCCATCCAAGGCTGGCGAAGATCCATTCGCGCTCTGCCGTACACATGAATTTCAGTAGG AGCTTGTCCATGTTCACCATGCGTCGTCTGATTATCGTCGCAACCGCCGCGGCCCTGATGGCCGGCTGTGCCAACCAGAACCCCTATGACAGCCAGGGTC AGGCGCAGGGCTCCACCGGGATGAGCAAAACCGCCAAGTACGGTGGCTTGGGCGCGCTGGCCGGTGCTATCGCCGGTGCCGCCATCGACCACAACAACCG TGGCAAGGGTGCGTTGATCGGTGCAGCCGCCGTCGGTGCCGCTGCCGCAGGCTATGGCTACTACGCCGACAAGCAGGAAGCCGCGCTGCGCGCGCAAATG GCAAACACCGGCGTCGAGGTTCAGCGTCAGGGTGACCAGATCAAGCTGATCATGCCAGGCAACATTACCTTCGCTACCGATTCGGCGAACATTGCCCCTA
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| Amino Acid Sequence |
>beta-lactamase domain-containing protein
MPGSQMPPQTTLIRETFPVGPLQCNCTLIGDPVSKKAIVVDPGGDPDKILARLQAHGLTLVSIIHTHAHFDHFLASGKLKELTGATLHLHKDDQPLWDNL EMQCQMFGVPYTPVPSPDRWLGDDEELACGCGVALHTPGHTPGSMSFWFAEAKLLVAGDTLFRRGIGRTDLWGGDQRAIVRSIKERLYRLDEEAIVVTGH GPDTRLGDEMRENPFVRA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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