Pseudomonas taiwanensis DSM 21245, H620_RS0112085
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas taiwanensis DSM 21245 H620DRAFT_scaffold00019.19_C, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GCGCTCGCGGGCGCGTTTTTCCAGCGGCCAGCGGACCAGCACGAACAGTGCATACAGCGCGAAGGCGATCATGCCGTACAGAGCGAAATCGGAGACCGCG CGCCAGGCGTTGTTGCCCACCTTGAAGGCAACGTCCAGGGTGGTGATGGCGATGGCCGGGGCGAAGCTTTCCTTGACCGGGTCTACGATGGTTGGGGTCA GCAGCAGCACCGCCAGGATCACCCGCAGCGGTTCACGCAGCCAGCGCCACATCCAGCCGGTGAGTTTGAAGCCCACCAGCAGGCAGCCCAGGGCGGCAAG GGCGTAGAGGCCCCAGGCGAGGGTATAGTCGTTCTCGGTCATGGTGATCGTGCAAGCCAGGCAAAGAGATGCCTATGATAAACACTTTTCAGGGCGCAGG CGCCCCCCGGCGACAGCGCTAGCCTGTTAGGGCCTCTTCGCGGGTTTCCCCGCGAGGGGGCAGGTACGCGCACCGACAGCCCCCAGCCAAGAGATCCCCG
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| DNA Sequence for Gene |
>H620_RS0112085
ATGCCCAGCAAACCTCAGCCCCCCATCGCCCGCCAAGACTCGGCAACCGACCCCTACGCCTGGCTGCAACAACGCGACACCCCTGAAGTACTGGCCTACC TGCAAGCGGAAAACACCTACCAGCAAGCCTGCCTGGCCGACCAGGCGCCCTTGCGCGAGCAGCTGTTCGAGGAGATCAGGGGCCGTATCCAGGAAACCGA CCTGTCGCTGCCCTCGCCCTGGGGCCCGTACCTGTACTACACCCGCACCACGGCGGGCGACGAATACCCCAGGCACTATCGCTGCCCGCGCCCGGCGGAC GACGCCAACACCGTCGATGAAAGCCGCGAGCAGCTGCTGCTGGACCCCAACGCCCTGGCCAATGGCGGCTTCCTGTCGCTGGGCGCGTTCAACGTCAGCC CCGACCACCGCTTGCTGGCCTACAGCCTGGATACCAGCGGCGACGAAATCTACACGCTGTACGTCAAGGACCTGGCCGACGAGAGCGTCACCACCCTGCC CTTCGACGACTGTGACGGCAGCATGACCTGGGCCAACGACAGCCAAACGCTGTTCTTCGCCGAGCTGGACGACACCCACCGCCCGTGGCGCCTGCGCCGC CACACCCTCGGCGAGGCCTCGGCAGCGACGGTGTTCGAAGAGACCGATGGCCGCTTCTTCCTGCACTGCTACCGCTCCAGCTCCGAGCAGCAGCTGGTGC TGCTGCTCAACAGCAAGACCACCAGCGAGGCTTGGGTGCTCGACGCTAGCACCCCGCAAGCCGAATTCACCTGCCTGGCACCGCGCCAGGAAGACCACGA GTACTTCCCGGACCACGGCCAGCTTGACGGTGAGTGGCGCTGGTTCATCCGCACCAACCAGGATGGCATCAACTTTGCCCTGTACCACGCACCGGCCAGC CAGGTACCAACCCGCCAGCAATGGCAGGTGCTGGTACCGCATCGCGATGAAATCATGCTCGAAGGCCTGAGCCTGAACGCCAGCGCCCTGAGCCTGAGCC TGCGCGAAGGCGGCTTGCCGATCATCGAGGTTCGTCCACAGGGCCTGCAGCCGTACCGTGTCGAATTGCCCGATGCGGCCTACAGCCTGTATGTGCAGGA CAGCCTGGAGTTTTCCAGCCCCCGCATTCGCCTGCGCTACGAGGCCCTCAACCGCCCGGCCCAGGTACGCCAGCTGGAACTGGCCAGCGGTGCCCAGCAA GTGCTCAAGCAAACCCCGGTGCTAGGGCCATTCGACGCCGACGACTACGTGAGCGAACGCTTGTGGGCTATCGCCCAGGACGGCACCCGTGTGCCGATCA GCCTGGTGCGCCGGCGTACGGATGCCGGCAAGGTCGTGCCACTGTACCTGTACGGCTACGGCGCCTATGGCGAGAGCCTCGACCCATGGTTCTCCCATGC CCGCCTGAGCCTGCTGGAGCGCGGCGTAGCCTTCGCCATCGCCCACGTCAGGGGCGGCGGCGAGCTGGGTGAGGCTTGGTACCGCGCGGGCAAGCAGGAG CACAAGCAGAATACCTTCAACGACTTCATCGCCTGCGCCGAGCACTTGATCGCCGAAGGCGTGACCTGTGCCGATCGCCTGGCCATCAGCGGCGGCAGCG CTGGTGGGTTACTGATCGGCGCCGTGCTCAACCTGCGCCCGGAGCTGTTCCGCTGCGCCATAGCCGAAGTGCCGTTCGTCGACGTTCTCAATACCATGCT CGACCCCGACCTGCCGCTGACCGTCACCGAGTACGACGAATGGGGTAACCCGCAAGCGCCAGAGGTGTATGAGCGGATCAAGGCCTACGCCCCCTACGAA AACGTGAAGGCCCAGGCCTATCCGGCCATGCTGGTGGTCGCCGGCTACAATGACAGCCGCGTTCAGTACTGGGAGGCCGCCAAGTGGGTGGCACGCCTGC GCACGCGCAAGACCGACGACAACCTGCTGCTGCTCAAGACCGAAATGGGCGCCGGGCACGGCGGCATGAGCGGTCGGTACCAAGGGCTCAAGGACGTGGC CTTGGAGTACGCGTTCGTGTTGAATGAGCTGGGCGTGGCGTAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
ATCGCGTTTTTTGTTGTCATACCCAGCGCAGCGCACCTGAAGGTCCTAACGCCGGCAATCCGGCTCCAGAAGGTGTGCCCCACGCTCTCGGACAACAGCC GCGAAGAAGAACGACACATGCCCGACCAAACCCTTCTGAACACCGAAATCCGCGACATGCTCATGGACTGCGGCCAGTTCGACAACCTGCAGCTCAGCGA CTTCCAGGCCGCCGCTGGTTATTTCAGCCTGACCGAAATCCGTGAGGGCCATACCATCTTCAACGAAGGCGACGCCGGTACCTTCATGTGCATCCTGCAC CAGGGCGTGGTCTCGGTGCGCAAGACAGACAGCACGGGTGCCCAGGTCGAAATCGCCACCCTGCGCAAGGGCCGCGCCTTCGGTGAAATGGCCGTACTCG ACGGCGAACGGCGCTCGGCCAGCTGCATCGCCGCCAGCGACTGCCTGCTGTTGACCCTGGGCAAGGACTCGCTGGAAAAGATGCTCAATGAGGCACCCCG
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| Amino Acid Sequence |
>oligopeptidase B
MPSKPQPPIARQDSATDPYAWLQQRDTPEVLAYLQAENTYQQACLADQAPLREQLFEEIRGRIQETDLSLPSPWGPYLYYTRTTAGDEYPRHYRCPRPAD DANTVDESREQLLLDPNALANGGFLSLGAFNVSPDHRLLAYSLDTSGDEIYTLYVKDLADESVTTLPFDDCDGSMTWANDSQTLFFAELDDTHRPWRLRR HTLGEASAATVFEETDGRFFLHCYRSSSEQQLVLLLNSKTTSEAWVLDASTPQAEFTCLAPRQEDHEYFPDHGQLDGEWRWFIRTNQDGINFALYHAPAS QVPTRQQWQVLVPHRDEIMLEGLSLNASALSLSLREGGLPIIEVRPQGLQPYRVELPDAAYSLYVQDSLEFSSPRIRLRYEALNRPAQVRQLELASGAQQ VLKQTPVLGPFDADDYVSERLWAIAQDGTRVPISLVRRRTDAGKVVPLYLYGYGAYGESLDPWFSHARLSLLERGVAFAIAHVRGGGELGEAWYRAGKQE HKQNTFNDFIACAEHLIAEGVTCADRLAISGGSAGGLLIGAVLNLRPELFRCAIAEVPFVDVLNTMLDPDLPLTVTEYDEWGNPQAPEVYERIKAYAPYE NVKAQAYPAMLVVAGYNDSRVQYWEAAKWVARLRTRKTDDNLLLLKTEMGAGHGGMSGRYQGLKDVALEYAFVLNELGVA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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