Pseudomonas taiwanensis DSM 21245, H620_RS0110370
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas taiwanensis DSM 21245 H620DRAFT_scaffold00016.16_C, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CGGGCTGTCGGCGAGCAGGTCTGGCAGGGTAATGCTCAGGCTGTGCCAGCCGACATCCGGGAACTTGCGCCGTAGCGGCCCCACCGCGTTGGGCCAGTCG GCCGTTTCGCCGGCACCGGGTACGATGATTACCGCGCCTTGTGGGTCACCGTCGTTAGCCGGTTTCCAAAGGGCCAGAAAACTGTCCGCACCCGCTTGCA AGGTGCGTTGTTCGGCTTTGGGCACCAGGCGCTCCAGGGCCAGGGCATCTTCCTGGCTGCGTTCGAGCAAGGGGGCGCGCGAGGCGGCGGTGGCCGGCGT TTCGGTTGCGGCCTGCGGTTGTTCGGCGTCGGCTGCCATGGCGCCGAACGGTAGAAGCGAGGCCAGGCAGCACATTGCCAGCGTCGTGCGATAAAGTGTG GACATGAATCAACCCAAGGCCAGAATGATCCCGGCAGCCTAATAGTATTTGCCCGCGACGGCCATGCTGCATGGCCGCCCTTGCCAAGACGAGCGTGTAG
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| DNA Sequence for Gene |
>H620_RS0110370
ATGAAGCGAGTGCGTCGCCTGTTGGTTATCGGCTGGTTATGGCTGCCCTTGATCGCCTTTGCTGGGTCACAGGCGCCTGCGCCGGTGGCACTGGAACCGG CCCAGCAGCAATGGCTCGAGGCCCATCGCAGTTTGCGGGTCGGCATTGTGCTGCAGGCGCCCTATGCCCAGTTCGACCGGCGCCTGCAGCAACTGTATGG GGCCAACGTCGAACTGGTGAACGGGTTGGCGCAAGCGCTGCGCCTGGATCTGACCTGGCGCAACTTCCCCGACCAGTCCAGTCTCGAGCATGCCCTGCAG GCCGGCGAGGTGGATTTCGCCCCCGGCCTGACCCAGACGCCGGCAAGCCTGCGCTTGTGGCTGTTCAGCGACCCCTACATGCGTGTGCCGCAACTGGTGG TAGGGACACGTACCGGCGCAGTGGCTGTCGAGCTGGAGAAGCTCGGGGCTCATGAGCGTGTAGCGGTACGCATGCCGAGCGCACTGGCTGATTATCTGCG TGGCAACTACACCAACCTTAACCTGCAAGGGGTGCCCAACGAGCGCGAGGCGCTGCAATTGGTGGTCGGCGGCCAGGCCAGCTATGCAGTGGTGGATGAA GCCCAGCTCAGTCGGCTGTCTCGCGAAACTGAGTTCGGCGAGCTGGCGGTGGTCGGCGATATCGGTCTTCCGCAACTGCTGCGCATCGGTTCGCGCCGCG ACTGGCCACTGCTGGCCGATGTGCTCGAACGCGGCGTGCAGGCCATGCCGGCCAAGGAGCTGGAGCAGTTGCACCAGCGCTGGCTGCAGCCCAAGTATCC CCGCTTCAGCGAGTCGGCCGGCTTCTGGCAGAACCTGACATTACTGTTGGGCCTGTTGCTGCTGTGTGCCCTGGCTACCTTGGCCTGGCAGCGTCGCCAG CAGCGCCAGGTCGAGCGCAGCCTCCTGGCCGCCCGCGAAACCCTGGCGCAACGCCAGACCCGCGAAGAAGCCCTGCGCCTGAGCCAATTCGCCATCGACC AAAGCACGGTGGGGATCCTGTGGGTTAACTGGGACAGTCACATCCGCTATGCCAACCATGCTGTCGAGCGCATGCTCGGGTATGGCGAGGCACAGTTGTT GGACCGTCCGCTGATCGACTTCGAGCCGAGCCTGAACATGGACCGCTGGCTGGACTTGTGGCGGGCGGCGCGTGCTGGCGATGGCGGCGTCAGGCAGTTC GAGACGCGTTGCCTGCATGCCGACGGCAGCCTGATTCCGGTCGAGTTGTCGCTGAGTTTCCTGCGCTTTCGCGATGCCGAGTACTTGGTCGTGTACCTGG CTGACGTCACCGAACGCCATCGCGCCTTGGCGGCGCTGCGTGAAAGCGATGCGCGGCTCAAGGGTATCGCGGGCAACGTCCCAGGGCTGGTGTTCCGACT GGAACCGGACCCTGCCGAGGGCGACCTGGAGTTTCCCTACATCAGCGAGGGCAGCGAGGCGCTGGTGGGTTATACGCCCGCGCAGATCCAGCATCCGCAA ATGGGCTTGCGTAACCTGGTCCATCCAGAAGACCGGGCGAATTATCATCAGGTGCAGGACCTGGCCATCGCCTCAGGGCAGGACTGGTCCTGGCAAGGGC GCATCCTGACCCGTGAGGGCGAAGAGCGTTGGGCCGACATCAAGGCCAGTGCCCGGCGCCTGGCCAGTGGTCGGGTAGTCTGGGACGGCATCGTCTGGGA CATTTCCCAGAGCAAGCAGGCCCAACTGGCCCTGGCGCGGTCCCAGGAGCAACTGCGTGAGTTGTCGGCGCACCTGGAGAGCGTGCGTGAGGAAGAAAAG GCGCGTATCGCCCGGGAAGTGCACGACGAACTGGGGCAGATGCTCACCGTGCTCAAGCTGGAGTTGTCGATGTGCGAACTGGCCTATGCCGAACTGGACC CCGGCCTGAACGAGCGCCTTGCCAGCATGAAGCGCCTGATTGCCCAGTTGTTCCAGTTGGTGCGTGATGTCGCCACTGCCTTGCGGCCGCCCATTCTCGA TGCCGGTATCGCCTCGGCCATCGAGTGGCAGGCCCGTCGCTTCGAAGCGCGCACGCAGATACCTTGCCTGGTGCAAGTGCCGGATAATCTGCCAGCATTG AGCGATGCCAAAGCCACAGGGCTGTTCCGCATCCTCCAGGAAGCCCTGACCAACGTCATGCGTCATGCCCAGGCGCACAGCGTGGAAATCGAACTGGTGC GCGAGGCAGGGCAGTTGCGCATGACGGTCAGTGACGATGGCGTGGGCTTTTGTCGCGACCAGGCCCGACCGACCTCGTTCGGTCTGGTGGGTGTGCGCGA GCGGGTGCTGATGCTTGGTGGCAGCATGACCCTGGACAGTGAACCGGGCGAGGGCACCAGCCTGAGCGTGGCCATTCCGTTGGAGTAG
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GAGAACGATCGTGATTCGAGTGTTGGTGGCCGAAGACCACACCATTGTCCGTGAAGGCATCAAGCAGCTCATTGGCCTGGCCAAGGACATGCAGGTGGCG GGGGAGGCCAGTAACGGCGAGCAATTGCTGGAAACCCTGCGCCATACCCCCTGCGAGGTGGTCTTGCTGGATATCTCCATGCCCGGTGTGAATGGCCTGG AAGCCATCCCGCGGATACGCGCGCTCAACGACGCCCCAGCGATTCTCATGCTGTCGATGCACGACGAAGCCCAGATGGCGGCGCGCGCGCTCAAGGCCGG TGCGGCGGGCTATGCCACCAAGGACAGTGACCCGGCCTTGCTGCTGACTGCCATACGCCGGGTGGCTGGAGGTGGGCGCTACATCGACCCGGCCCTGGCC GACCGCATGGTGTTCGAGGTAGGCCTGACCGAGACTCGGCCGTTGCACACGTTGCTCTCCGAGCGTGAGTTTTCCGTGTTCGAGCGCCTGGCTCAGGGGG
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| Amino Acid Sequence |
>histidine kinase
MKRVRRLLVIGWLWLPLIAFAGSQAPAPVALEPAQQQWLEAHRSLRVGIVLQAPYAQFDRRLQQLYGANVELVNGLAQALRLDLTWRNFPDQSSLEHALQ AGEVDFAPGLTQTPASLRLWLFSDPYMRVPQLVVGTRTGAVAVELEKLGAHERVAVRMPSALADYLRGNYTNLNLQGVPNEREALQLVVGGQASYAVVDE AQLSRLSRETEFGELAVVGDIGLPQLLRIGSRRDWPLLADVLERGVQAMPAKELEQLHQRWLQPKYPRFSESAGFWQNLTLLLGLLLLCALATLAWQRRQ QRQVERSLLAARETLAQRQTREEALRLSQFAIDQSTVGILWVNWDSHIRYANHAVERMLGYGEAQLLDRPLIDFEPSLNMDRWLDLWRAARAGDGGVRQF ETRCLHADGSLIPVELSLSFLRFRDAEYLVVYLADVTERHRALAALRESDARLKGIAGNVPGLVFRLEPDPAEGDLEFPYISEGSEALVGYTPAQIQHPQ MGLRNLVHPEDRANYHQVQDLAIASGQDWSWQGRILTREGEERWADIKASARRLASGRVVWDGIVWDISQSKQAQLALARSQEQLRELSAHLESVREEEK ARIAREVHDELGQMLTVLKLELSMCELAYAELDPGLNERLASMKRLIAQLFQLVRDVATALRPPILDAGIASAIEWQARRFEARTQIPCLVQVPDNLPAL SDAKATGLFRILQEALTNVMRHAQAHSVEIELVREAGQLRMTVSDDGVGFCRDQARPTSFGLVGVRERVLMLGGSMTLDSEPGEGTSLSVAIPLE
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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