Pseudomonas taiwanensis DSM 21245, H620_RS0125020
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas taiwanensis DSM 21245 H620DRAFT_scaffold00012.12, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CGAGTCGGTGTCCGCCGGCGTGGTCGATGCCGAGGTGCAGGACAAGGCCGTGCTGCTTCGGGTGCTTACTGTCGACGACTCGTCGGTGGCGCGCAAGCAG GTCAGTCGTTGCCTGCAGACGGTCGGTGTCGAGGTGGTGGCGCTCAACGATGGTCGTCAGGCCCTGGATTACCTGCGCAAGCTGGTGGACGAGGGCAAGC GACCCGAGGAGGAGTTCCTGATGATGATCTCGGACATTGAAATGCCGGAAATGGATGGCTATACGCTGACTGCGGAGATTCGCAGTGACCCGCGTATGCA AAAGTTGCACATCGTCCTGCATACTTCATTGTCGGGGGTGTTCAACCAGGCCATGGTCAAGAAGGTCGGCGCCGATGACTTCCTGGCCAAATTCAAGCCG GACGACCTTGCCCAGCGCGTGGTCGACCGGATCAAGGCAACGCATTGAAGCAGTTGGGGGGACAGCTCCCGACACCAGTGATTGAAAAGAGGCGGCGTTA
|
|
| DNA Sequence for Gene |
>H620_RS0125020
GTGTCTACGGGTAATTTGGATTTCGAACAGTTCCGGGTATTCCTGGAGAAAGCCTGTGGCATCCTGCTGGGCGAGAATAAGCAGTATCTGGTCTCCAGCC GTCTCAACAAGCTGATGGAGCAGCAGGGCATCAAGAGCTTGGGCGAGCTGGTCCAGCGTATTCAGACGCAGCCGCGTGGTGGGCTGCGCGAGCAGGTGGT CGATGCCATGACCACCAACGAGACCCTGTGGTTTCGCGACACCTATCCGTTCGAAGTGTTGAAGAACAAGGTGGTTCCGGAGTTCATCAAGAACAATCCG GGTCAGCGTCTGCGCATCTGGTCGGCGGCCTGTTCGTCGGGGCAGGAGCCTTACTCCATCTCCATGGCGCTGGACGAGTTCGAGCGCAGCAACCTCGGAC AGTTGAAGATGGGAGCGCAGATCGTCGCCACCGACCTGTCCGGTTCGATGCTGAACAACTGCAAGACGGGTGAGTACGACAGCCTGGCGATTGCCCGTGG TTTGTCCCAGGAGCGGTTGCAGCGTTACTTCGACACCAAGGGGCCAGGGCGTTGGGCGGTGAAGCCGGCCATTCGTAGCCGTGTCGAGTTCCGTTCGTTC AATTTGCTCGACAGCTATGCGGCGCTGGGCAAGTTCGACATCGTGTTTTGCCGCAACGTGCTGATCTACTTCTCGGCGCAGGTGAAGAAAGACATTTTGA TGCGCATTCACAGCACCTTGAAACCGGGTGGTTATCTGTTCCTTGGCGCTTCCGAGGCGCTGAACGGGCTGCCGGATCATTACCAGATGGTGCAGTGCAG CCCGGGGATCATCTACCAGGCCAAGTGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
TCAGGAGGGGGCGGGTGCTTGTCTGTGGGGTGTGGCGCCTGTGAGATCGAGCGCCGCCCGCGCGGCGCATCCCCAGCAAGGTTCGCTCCTACGTTTGTTC ACGGCCAATAACGTCTGTGGCAGGCGCGCGCGACCGCCGCAGCGCTCCCGACCAACCCCCATCGCCCCGCCATCTGCCCTCTGACGTCAATTTTTTGTTT TGCCGCTTTTGCCGTCCGGCAATTGCCGCTCAGGCATCTCCAGGCGGAAGCACTTTGCCGCTTTTCTGGCATGCCGGCGCTGCCGGTAACCGCAAAAACC CCGCAAACATGGGCTTCTACAGGTTTGGCACAGCACTTGCTAAAGCTTTGGCAATCACACGCTGGTCAACCTTTGAAGGTTCCCTGACATGAGCATCAGT TTCGACAAGGCGCTTGGCATTCACGAAAAGGCCCTGGGCTTCCGCGCCCAGCGTGCCGAAGTGCTGGCCAACAACATCGCCAACGCCGACACGCCCAACT
|
|
| Amino Acid Sequence |
>CheR-type MCP methyltransferase
MSTGNLDFEQFRVFLEKACGILLGENKQYLVSSRLNKLMEQQGIKSLGELVQRIQTQPRGGLREQVVDAMTTNETLWFRDTYPFEVLKNKVVPEFIKNNP GQRLRIWSAACSSGQEPYSISMALDEFERSNLGQLKMGAQIVATDLSGSMLNNCKTGEYDSLAIARGLSQERLQRYFDTKGPGRWAVKPAIRSRVEFRSF NLLDSYAALGKFDIVFCRNVLIYFSAQVKKDILMRIHSTLKPGGYLFLGASEALNGLPDHYQMVQCSPGIIYQAK
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|