Pseudomonas taiwanensis DSM 21245, H620_RS0107535
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas taiwanensis DSM 21245 H620DRAFT_scaffold00011.11_C, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GGGCAGCGAACCCTATGCTGCGCTGCAGGCCAGCGGCCTCGGACAACGCCTGTTCGCCCTCGAAGAAGACCTGCAGGCGCGCGCCCTCGATAGCGACCTG GCCAAGCCTGTCGATTACCCGGCTTTCGTCGCGCTTTCGCTGGAATATGACAAGGTCAACAGCTGGCTATGAGTACCCTGACTGTCGGTGATCGCGACAT CGCCCTGGACAAAGACGGCTTCCTGGTCGACCTGCAAGACTGGTCGCATCCGGTTGCCGAAGCCCTCGCTAGCCGCGAAGGCATTTCCCTGACCGCGGAT CACTGGGAAATCCTCGCTTTGCTGCGTCAGTTCTATGAGGAATACCAGCTGTCCCCGGCCACCCGCCCGCTCATCAAGTACACCGCGCTCAAGCTGGGCC CGGAGAAGGGCAACAGCCCGCACCTGAACCGCCTGTTCAATGGCACGCCCGCCAAACTCGCCGCCAAGCTGGCGGGCCTGCCCAAGCCGACCAACTGTAT
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| DNA Sequence for Gene |
>H620_RS0107535
ATGACCGAGCCGATGACCAACAGCCCGCGCCCACTCACTCTGCAAACCCCGGCCGAGCACCCTTTCGCCGAATTCGTACGCATTCTGGGCAAGGGTAAGC GCGGCGCCCGTAGCCTGACCCGTGAGGAAGCCCGCGCCGCGATGGCCATGCTGCTCGAAGGCCAGGTCGAGGACACTCAGCTGGGTGCATTCCTGATGCT GTTGCGGCACAAGGAAGAAAGTGCCGAGGAGCTGGCCGGTTTCACCGAAGCCCTGCGGGCACACCTGCAAGCACCCTCGATGGCCGTCGATCTGGATTGG CCCAGCTATGCCGGCAAGAAGCGCCACCTGCCCTGGTTCCTGCTGTCGGCCAAATGCCTGGCCCAAAACGGTGTGCGCATCCTGCTGCACGGCGGCGGCG CGCACACTGCCGGACGTCTGTACACCGAGCAACTGCTCGACCTGCTGCACATTCCGCTGTGCCGCGACTGGGCAGCGGTGTCCAGTGCCCTGGACCAGCA GCAACTGGCGTTCATCCCACTGCAAGACTGGGCCCCCCAGTTGCAACGCATGATCGACCTGCGCAACACCCTTGGCTTACGCTCACCGATTCACTCCCTG GCCCGGGTGCTCAATCCTTTGGGTGCCCGCTGTGGCCTGCAGAGCATCTTCCACCCCGGCTACCAGGCCGTGCATCGCGAGGCCAGCCGCCTGCTTGGCG ACCATGCCGTGGTCATCAAGGGCGATGGAGGCGAAATCGAGGTCAACCCCGATGTCATCAGCCACTTGTACGGCACCTCCGCCGGCGAGGCATGGGACGA GGAATGGCCGGCACTCAGTGAGCGCCGTCATGTCAAGCCAGCCAGCCTGCAACCGGAACATCTAATGACGGTATGGCGGGGCGAGGCACAGGACAGCTAT GGCGAAATGGCCGTGGTCGCGACGATGGCCTTGGCGTTGCGAGGGCTTGGACAATCGCGGGAGGAGGCCTTCGAAACCGCTCGCCACTACTGGACCGCGC GCAAACAATCGAAATAG
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
CCGATCAAAGCCCCCCAGTCTTTGCGCTATTTATTCGAACGTTTTCACCTAGACTGGGCTCCAACGACAAACACTTTGTTCCGAGGAGCTCAGCATGGGC CTTTTGATCGACGGCCGCTGGCACGACCAGTGGTATGAAAACGGCAAGGACGGCGCCTTCAAACGTGAAAACGCCCAACGCCGCAACGCGCTACCCGCTC CTGAAGCCGGCCGCTACCATCTGTATGTCTCGCTGGCCTGTCCATGGGCCCATCGCACCCTGATCGTACGCGCCCTCAAAGGGCTCGAACCCCTGATCGA CGTGTCGGTGGTGAGCTGGCTGATGGGCGAAAACGGCTGGACTTTCGACGTCCAGAACGGCTCCACCGGCGATCACCTGGACGCACTGAGCTACCTGCAC CAGCGCTATACCCAAGACGATCCGCATTACACCGGGCGCGTCACCGTGCCTGTGCTGTGGGACAAACAGCAAAAGCGCATCGTCAACAACGAGTCGTCCG
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| Amino Acid Sequence |
>hypothetical protein
MTEPMTNSPRPLTLQTPAEHPFAEFVRILGKGKRGARSLTREEARAAMAMLLEGQVEDTQLGAFLMLLRHKEESAEELAGFTEALRAHLQAPSMAVDLDW PSYAGKKRHLPWFLLSAKCLAQNGVRILLHGGGAHTAGRLYTEQLLDLLHIPLCRDWAAVSSALDQQQLAFIPLQDWAPQLQRMIDLRNTLGLRSPIHSL ARVLNPLGARCGLQSIFHPGYQAVHREASRLLGDHAVVIKGDGGEIEVNPDVISHLYGTSAGEAWDEEWPALSERRHVKPASLQPEHLMTVWRGEAQDSY GEMAVVATMALALRGLGQSREEAFETARHYWTARKQSK
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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