Pseudomonas taiwanensis DSM 21245, H620_RS0107085
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas taiwanensis DSM 21245 H620DRAFT_scaffold00010.10_C, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
AAGCGTGCCAACTGGCGGCGTGAAGATGCTGCCATGGCGTCCGTCGCCGCTCATCTGGCGAAGATGCTCAGCACCCGGGCCGGCAGCGTGCAGACGCTTG CCGACTACGGGTTGCCCGATCTCAACGACATGCGCCTGAGCCTGCACGACGCGCTCAGTCAGGCCCGCCAGGCCATCGAGCATTTCATCGAGGCCTACGA GCCGCGCTTGTCGGATGTCAGGGTGATTTCAAGACCGCGTGATCACGATCAGCTCAAGCTCGCTTTCAGTATCGAAGGCCAGCTTGAGGTGAACGGTATC AAGCGCCAGGTCAGTTTTGCCGCGCGCCTGGATGGCAGCGGGCAAGTCAGCGTAGGTCAGGGAGACTGGTGATGTTGCCTTGCACATGACTGGGCTCTCC CTGTGACTTTTTGACCACCACCGGCTAGCCGCACGCCGTCTGCCAGGGACTGCTCAGGCAGCCACGGTGGTACCCAGACCGAATTCAGGCGAAACGACAG
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| DNA Sequence for Gene |
>H620_RS0107085
ATGTCCTTCAATCATTACTACCAAAGCGAGCTGACGGCCCTGCGCCAGCTAGGTCGCCGTTTCGCCGAGCGCAGCCCGGCGTTGGCGCCGTACCTGGGCC AGGCCGGACGCGACCCCGATGTCGAGCGGCTGCTCGAAGGCTTTGCCTTTCTCACGGGTCGTTTACGCCAGAAGCTCGACGACGAGCTGCCTGAGCTCAC TCACTCACTGATGTTGCTGCTGTGGCCCAACTACATGCGTCCGTTGCCAGCCTTCAGCATCCTGCAGTTCGACCCGCTGCGCCAGGCCGGTCCGGCACTG CTGGTCGAGCGCGACACGCCAGTGGAAGGTCGGCCTATCGATGGGGTCAGCTGCCGCTTTCGCACCTGTTACCCCACCGAGGTCCTGCCGCTGAAACTGA GCGCGCTCAATTACTCGCTCAATGGTCAGGGCGCGCTGCTCAGCCTGCGCCTGGACATGAACTGCGATGGCCATGTCGGCGACGTCAAGCTCAGCCGCCT GCGCCTGCACCTGGCCGGAGAGCGCTACATCAGCCAGATGCTCTACTTGAGCCTGTTGCGCGGACTGGCTGGCATCGAGCTCATAGCGCTATGCAGCAAT GGCAAACCGTTGCTCAACGATGCTGGCGATCCGCTGGTCCTCAAGGCGCGGGATGCCAAGGTTCATCCGGTAGGGTTCGCCGAGGAAGAGGCGCTGATTC CTTACCCGTTGAACACGTTTCGTGGCTATCGCTTCTTGCAGGAGTACTTCGCCTTCCAGGACAAGTTCCTGTTCGTCGATGTCACTGGCCTGGACGTTCT GCAGCGGCTGCCCGAGGAAACCCTCAAGCAGGTGCACGGCGTGGAGGTGCGTTTCGATATCCGCAAAGCCGAAGCCCAGCGCCTGCGCCCGACCCTGGAC AATGTGAAACTGTACTGCACGCCAATCGTCAACCTGTTCAAGCACGACGCCTTGCCGATCCGCCTGGACGGCAAGCAGGACGAATACCTGCTGTTGCCTG CCGAGCTCGACCCCGAGCACTGCGGGGTATTCTCGGTCGATGGTGTCACCGGCTGGAGCCCCGGAGGGCTGGGCTACCAGGAATACGTGCCCTTCGAGTC CTTCGAGCACGACCCCAGCTTCGATGTGCCGCACAGCCGATCGCACTACAGCCTGCGCCAACGCTCTTCGCTGCTGCACGATGGCCTCGATACCTACCTG AGCTTCGGTGTGCATGGCGGCGAGTTCCACGAGACCTTGTCGATCGAGCTGACGTGCACCAATCAGAACCTGCCGCGGCGGCTCAAACTCGGTGACATCT GCATGCTGAGCGAGCAGACCCCCGAGTTCCTGACCTTCCGCAACATCACTGCGGTCACCTCCAGTTATGCACCGCCGCTCAATCGCGATTTTCTTTGGAA GCTGATCAGCAACATGTCGCTGAACTACCTGTCGCTGGCCGATGTGGACGCGCTGAAGGTCATTCTCGAAACCTATGACCTGCCGCGCTACTACGACCAG CACGCGGAGAAGGTCAGCCGACGCCTGCTCGGTGGGCTCAAGTCGATCCGCCACCAGCATGTCGACCGCTTGCACCGTGGCCTGCCGCTACGCGGCCTGC GCACCGAACTGACGATCGATCCCGAGGGTTACATCGGTGAAGGCGACCTGTTCGTCTTCGCCTCGGTGCTCAACGAGTTCTTCGCACTCTACGCCAGCCT CAACTCGTACCACGAGCTGCGGGTGAAAAGCACACAAGGGGAGGTGTACCAATGGACACCACGTATGGGCCTGCAGCCCCTGCTTTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GCCGGCTGAGCCGGAGCATCCGTGAATACTCGCTGTTCCAGGCGGTTCTGCTGGTCACCGAGCAGTTGCACGAGCATTACCCGTACCTGGAGGACGACGA GCTGTATGACCTGCTCGAGTTCGAGGCCAACCCGAGCCTGGGCTTTCCGCGCAGCGATGTCGACCGCGTCGAGTTCTTCCGCGAGCACGGCCAGTTGCGT GCGCGTCTTCGATTCAACCTGGTGAGCCTGATCGGTTCCAGCTCGCCGCTGCCCGCGTTCTATGGCGAACAGGCGTTGGGTGACAGTGAAGATGGCAACC CCACGCGCCAGTTTCTCGACCTGTTCCACCACCGGCTGCAACGCTTGCTCCTGCCGATCTGGCAAAAGTACCGCTACCGCGCCAGCTTCAAGAGCGGGGC GCTGGATGGCTTCTCATCGCACCTGTTCGCCTTGATCGGCCTGGGCGGTGAGGAGATCCGCAGGGCCAAGGAACTGAACTGGAAGCGCCTACTGCCGTAC
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| Amino Acid Sequence |
>hypothetical protein
MSFNHYYQSELTALRQLGRRFAERSPALAPYLGQAGRDPDVERLLEGFAFLTGRLRQKLDDELPELTHSLMLLLWPNYMRPLPAFSILQFDPLRQAGPAL LVERDTPVEGRPIDGVSCRFRTCYPTEVLPLKLSALNYSLNGQGALLSLRLDMNCDGHVGDVKLSRLRLHLAGERYISQMLYLSLLRGLAGIELIALCSN GKPLLNDAGDPLVLKARDAKVHPVGFAEEEALIPYPLNTFRGYRFLQEYFAFQDKFLFVDVTGLDVLQRLPEETLKQVHGVEVRFDIRKAEAQRLRPTLD NVKLYCTPIVNLFKHDALPIRLDGKQDEYLLLPAELDPEHCGVFSVDGVTGWSPGGLGYQEYVPFESFEHDPSFDVPHSRSHYSLRQRSSLLHDGLDTYL SFGVHGGEFHETLSIELTCTNQNLPRRLKLGDICMLSEQTPEFLTFRNITAVTSSYAPPLNRDFLWKLISNMSLNYLSLADVDALKVILETYDLPRYYDQ HAEKVSRRLLGGLKSIRHQHVDRLHRGLPLRGLRTELTIDPEGYIGEGDLFVFASVLNEFFALYASLNSYHELRVKSTQGEVYQWTPRMGLQPLL
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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