Pseudomonas taiwanensis DSM 21245, H620_RS0107075

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0005524 ATP binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR00300
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0016887 ATPase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00004
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature IPR001270 ClpA/B family 680 698 2.0E-33
Coils Coil Coil - - 442 462 -
NCBIfam TIGR03345 JCVI: type VI secretion system ATPase TssH IPR017729 AAA+ ATPase ClpV1 13 856 0.0
Gene3D G3DSA:3.40.50.300 - IPR027417 P-loop containing nucleoside triphosphate hydrolase 348 549 5.0E-46
Gene3D G3DSA:3.40.50.300 - IPR027417 P-loop containing nucleoside triphosphate hydrolase 155 347 7.6E-71
SMART SM00382 AAA_5 IPR003593 AAA+ ATPase domain 203 348 8.3E-10
Coils Coil Coil - - 417 437 -
PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature IPR001270 ClpA/B family 606 624 2.0E-33
CDD cd00009 AAA - - 188 339 1.13217E-14
PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature IPR001270 ClpA/B family 713 727 2.0E-33
Gene3D G3DSA:1.10.1780.10 - IPR036628 Clp, N-terminal domain superfamily 5 150 1.1E-20
SMART SM01086 ClpB_D2_small_2 IPR019489 Clp ATPase, C-terminal 773 864 4.2E-6
PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature IPR001270 ClpA/B family 651 669 2.0E-33
PANTHER PTHR11638 ATP-DEPENDENT CLP PROTEASE - - 82 856 0.0
FunFam G3DSA:3.40.50.300:FF:000025 ATP-dependent Clp protease subunit - - 555 771 5.9E-83
CDD cd19499 RecA-like_ClpB_Hsp104-like - - 563 771 3.0979E-81
FunFam G3DSA:3.40.50.300:FF:000010 Chaperone clpB 1, putative - - 155 347 2.5E-84
Gene3D G3DSA:3.40.50.300 - IPR027417 P-loop containing nucleoside triphosphate hydrolase 555 771 1.1E-66
Pfam PF07724 AAA domain (Cdc48 subfamily) IPR003959 ATPase, AAA-type, core 602 767 2.3E-42
SUPERFAMILY SSF81923 Double Clp-N motif IPR036628 Clp, N-terminal domain superfamily 18 134 1.59E-10
SMART SM00382 AAA_5 IPR003593 AAA+ ATPase domain 602 763 1.2E-8
SUPERFAMILY SSF52540 P-loop containing nucleoside triphosphate hydrolases IPR027417 P-loop containing nucleoside triphosphate hydrolase 551 839 1.33E-55
Coils Coil Coil - - 568 588 -
Pfam PF10431 C-terminal, D2-small domain, of ClpB protein IPR019489 Clp ATPase, C-terminal 778 846 5.0E-10
SUPERFAMILY SSF52540 P-loop containing nucleoside triphosphate hydrolases IPR027417 P-loop containing nucleoside triphosphate hydrolase 165 527 1.47E-69
Pfam PF00004 ATPase family associated with various cellular activities (AAA) IPR003959 ATPase, AAA-type, core 208 339 2.6E-9
Pfam PF17871 AAA lid domain IPR041546 ClpA/ClpB, AAA lid domain 349 441 1.4E-28
Coils Coil Coil - - 508 528 -
Gene3D G3DSA:1.10.8.60 - - - 776 864 7.3E-9

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.