Pseudomonas taiwanensis DSM 21245, H620_RS0107055

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas taiwanensis DSM 21245 H620DRAFT_scaffold00010.10_C, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
AGCCGGTTTGCTGCGCCACAGTATCGGTGCCTTGCAGCAAAGCTTGCGCACCCGTAGCGAGCTCAAGAACGAGTTGCGCCTGTCGCTCACCACCCCGCAA GGCGCCAGCCGGAACCCGATCAAGGCGCCGCTGGAAGCCGACCAGGCCCTGGGCGAGTTGCTCAAGCCGCGCCGGCCCGGACAGTTGTCGGCCGAGCAGG CCGTGGCCCAGGCCTTCCGTGACTTGCAGGCACACCAGGTGGCTTTGCTTGGTGCCAGTCGCAGCGCCTTGCGTAGCACCCTCGAACACTTTGCCCCCAG TCAGTTGGCGTTGCAGTTCGAACGCCTGGGTCGCAAGCCGTGGTTCGGTAGCCGCTGGAAGCAATACGTGCGCTACCACGAAGCACTCAGTGCCGATGCC GACTGGAGCGAGCGCCTGCTGGCCAAGGACTTCGCCCAAACCTACGAAGAGCAGGTGCGCCTGATCGCTTCCCTTCACCACGATCCGCGAGGATGACTGC
DNA Sequence for Gene
>H620_RS0107055
ATGAAACCTATCACCCGCAAATGCTTCGGGGCAGCGTGGGCTTTGGTTGCCGCGACCTGGTTGACCGGCTGTGCCGCGCTGTCGCCGTATTCGCACATGA CCAAGCTCGACCTGACACTGACCGCCACCGACGCGCTCAACCTCGACATCAACGGCCGGCCGTCGCCGGTAGTGGTACGTCTGTTCGAGCTCAAGCACCC GGTCGCGTTCGAAAGCACCGACTTCTTCACGCTCTACCAGCGCCCGAAAGAAGCCCTCGACCTGGACATGGTTGCCAGCGAAGAGCACGAACTGCGCCCA GGCGAAACCCTGAGTCTGAACCTGAGCATCGACCCAGGCAGCCGCTTCGTCGGCGTGCTGGCCGCCTATCGCGACCTGGAGCAAGCCGAGTGGCGCCGGG TGCAGCCGGTTCGGGCCGGTGAGCGGACGGTCGTCAACCTGTACCTGGACAAGACCGGTATTCACAACGGCGTACCAGCGGTAGTCCAAGCGGGTGAACA GCCATGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
ACGTGCACAAGGTAGTCTGGCAGGAAGGCATGCTGCTGCGCCCGCAGCATTTCCAGCACAACGACCGCTACTACGACAGCCAGATGAAAACCCGCACGCA GCTGCTGGGTAATTGCACCTGGGGTTTCATCGATCTGGAGATCGACCTGCAGTTCCTGACCATGGGCAAGCTGGTGATCAGTCGTGCCGCAGGCATCCTG CCGGATGGCAGTCTGTTCGAGCTCGATGGCAGCAGTGAACCGCTGGCCCTGGACGTGCCGCCAAACACCGGCAGCACGCCGATCTTCATGGCCTTGCCGC TGGTCACCGGAAACCACATCGAGGCCCGCCGGCCGGAGCAGGCCGAGGTATTGACGCGCTATACCACCTACGAGCTGGAGGTCAGCGATTCCAACGCGGG CGATGACAACAGCACCCAGATCAACTGCGCGCGCCCGGACTTCCGCCTGCTGCTGGGCGAGCAGCAGGGCGACCAGGCGTACGTCAAGCTCAAGGTGTGC
Amino Acid Sequence
>type VI secretion protein
MKPITRKCFGAAWALVAATWLTGCAALSPYSHMTKLDLTLTATDALNLDINGRPSPVVVRLFELKHPVAFESTDFFTLYQRPKEALDLDMVASEEHELRP GETLSLNLSIDPGSRFVGVLAAYRDLEQAEWRRVQPVRAGERTVVNLYLDKTGIHNGVPAVVQAGEQP
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site