Pseudomonas taiwanensis DSM 21245, H620_RS0104975
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas taiwanensis DSM 21245 H620DRAFT_scaffold00008.8_C, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CGGATTACCTGCCGATCGTCGGGCCTGTGGCCGAGCCGCAGGCGTTCAACGAGGCCTACGCGGTGCTGGGCAAGGATGCGCGGCAGGTGCCGGACGTGCC GTGTCCGTGGGTCGAAGGGCTGTACGTGAACAGCGGGCATGGGTCGCGCGGGCTGATTACCGCGCCGCTTTGCGGGGAACTGGTGGCGGCTTGGGCAAGC GGTGAGCCATTGCCAGTGCCACAGGCAGTGGCACAGGCCTGTCATCCGAATCGGTTCGCGTTGCGCCGGTTGATTCGGGGAACGTGATGGGCGGGTTGCC GATCGATGGGGTGCGTCTGTGGGATCGGGCGCGACCCGCGCGGCGTATCGCGAGCACGGCTCGCTTCTGGCGCGGTGTGTAAGCGCAGCGGGCTGCATAT AACAGATCGTTCTAAAACTCTCACAATCCCCTCCGGTCAGTTTCTGGTACACGCCCTTCACAGGGCACTGATTCCCCAACGGAAAAACCGGTAAGGACCT
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| DNA Sequence for Gene |
>H620_RS0104975
ATGTGCGGATTAGCAGGAGAGTTACGTTTCACCCCCCTCGACCAAGCCCCTCGCCCGGCCGACCTGGCCGCGGTAGAGCGCATCACTCATCACCTGGCGC CCCGAGGCCCCGATGCCTGGGGTTTCCATAGCCAAGGCCCGATCGCCCTCGGCCACCGTCGGCTGAAGATCATGGACCTGTCCGATGGCTCGGCCCAGCC GATGGTCGACAACACCCTGGGGCTGTCGCTGGCGTTCAACGGCGCCATCTACAACTTCCCCGAGTTGCGCCAAGAGCTGCAGGACCTGGGCTACACCTTC TGGTCCGACGGCGACACCGAGGTGCTGCTCAAGGGCTATCACGCCTGGGGCGCCGCCTTGCTGCCCAAGCTCAACGGGATGTTCGCCCTGGCTATCTGGG AGCGCGATCAGCAGCGCCTGTTCCTGGCCCGCGACCGTCTGGGCGTCAAGCCGCTGTACCTGTCTCGCAACGGTGAGCGCCTGCGCTTCGCGTCGACGCT GCCTGCGCTGCTCAAGGGCGGCGACATCGATCCGATGATCGACCCGGTCGCCCTCAACCACTACCTGAACTTCCACGCCGTGGTGCCGGCGCCACGCACA CTGCTGGCCAACGTGCAGAAACTGGAACCGGGCACCTGGATGCGTATCGACCGCCATGGCGAAGTCGAGCGCCAGACCTGGTGGCAGCTGCACTATGGGC CGAACCTGAATGAGCGGGAGCTCGACCTTGAAGGCTGGACCACCCGGGTGCTCGATGCCACCCGCGAGGCGGTGGCCATTCGCCAACGCGCCGCGGTGGA TGTCGGAGTGCTGCTTTCCGGTGGGGTCGACTCCAGCCTGCTGGTCGGCCTGCTGCGTGAAGTCGGCGTGGACGACCTGTCGACCTTCTCCATCGGTTTC GAGGACGCAGGCGGCGAGCGCGGCGACGAGTTCCAGTACTCCGACCTGATTGCCAAGCACTACGGCACACGACACCACAAGCTGCGCATCGCCGAACAGG AAATCATCGAGCAGTTGCCGGCCGCCTTCCGTGCCATGAGCGAACCGATGGTCAGCCACGACTGCATCGCTTTCTACCTGCTGTCGCGCGAAGTGGCCAA GCACTGCAAGGGCGTGCAGAGCGGCCAGGGCGCCGACGAGCTGTTCGCCGGCTACCATTGGTACCCGCAGCTGGAGGGCGCCCAGGATCCTTACAGCGCC TACCGCGACGCGTTCTTCGATCGCAGCCATGCCGAGTATCGCGACACGGTACAGGCCCCCTGGTTGCTGGAAACCGACGTTGCCGGCGACTACGTGCGTG AACACTTCGCCCGGCCGGGTGCCGCCGATGCCGTCGACAAGGCCCTGCGCCTGGACAGCACGGTGATGCTGGTGGACGACCCGGTCAAGCGCGTCGACAA CATGACCATGGCCTGGGGCCTGGAAGCCCGAACGCCGTTCCTGGATTACCGTCTGGTCGAGCTTTCGGCGCGCATTCCGGCCCGTTTCAAGCTGCCCGAT GGCGGCAAGCACGTGCTCAAGCATGCCGCGCGGCGAGTTATCCCCCATGAGGTGATCGACCGCAAGAAAGGTTACTTTCCCGTACCGGGCCTCAAGCATT TGCAAGGCGCGACCTTGGACTGGGTGCGCGAACTGCTGACTGACCCCAGCCAGGACCGTGGACTGTTCAACCCTGCCATGCTCGACCGCCTGCTGAGTAA CCCTCACGGCCAACTGACCCCGCTGCGTGGCTCCAAGCTGTGGCAACTGGCAGCCCTGAACCTGTGGCTCAGCGAACAAGGAATCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
CCGATGAAAGCTCACGAAATCGCTTACGGTCAGCGCCTGCTGCGTGGCCAGTCGCCGTCCTATGAGCGCCTGCAGGCGCGCCTGGCCGGTGACGGCAGCG AACCCCACGACCAGCCCCGGGCACTGCACTGCGGCTGGGGCCGCCTGCTGATCGGCCACACCTTCCCGGATGCCCCGAGCCTTGCCGAGGCGCTGCAGGA GGAGCGCCCCGGCGAGCGCGATATCGCGTTGTACGTGGCCGCGCCCCAGCAAGTGCTGGCCCAGGCGCCGCAGCATCTGTTCCTCGACCCTTCCGACACC CTGCGTCTGTGGTTTACCGACTACCGTCCGGCACAGCGGGTATTCCGCGGGTTTCGTATCCGCCGGGCGCAAAGCGAAACTGACTGGCAGGCCATCAACG GCCTGTACCAGGCGCGAGGCATGCTGCCGATCCAGGCCGAGCGACTGACGCCGCGCCACCTGGGCGGGCCGGTCTACTGGCTGGCCGAAGATGAAGACAG
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| Amino Acid Sequence |
>asparagine synthase
MCGLAGELRFTPLDQAPRPADLAAVERITHHLAPRGPDAWGFHSQGPIALGHRRLKIMDLSDGSAQPMVDNTLGLSLAFNGAIYNFPELRQELQDLGYTF WSDGDTEVLLKGYHAWGAALLPKLNGMFALAIWERDQQRLFLARDRLGVKPLYLSRNGERLRFASTLPALLKGGDIDPMIDPVALNHYLNFHAVVPAPRT LLANVQKLEPGTWMRIDRHGEVERQTWWQLHYGPNLNERELDLEGWTTRVLDATREAVAIRQRAAVDVGVLLSGGVDSSLLVGLLREVGVDDLSTFSIGF EDAGGERGDEFQYSDLIAKHYGTRHHKLRIAEQEIIEQLPAAFRAMSEPMVSHDCIAFYLLSREVAKHCKGVQSGQGADELFAGYHWYPQLEGAQDPYSA YRDAFFDRSHAEYRDTVQAPWLLETDVAGDYVREHFARPGAADAVDKALRLDSTVMLVDDPVKRVDNMTMAWGLEARTPFLDYRLVELSARIPARFKLPD GGKHVLKHAARRVIPHEVIDRKKGYFPVPGLKHLQGATLDWVRELLTDPSQDRGLFNPAMLDRLLSNPHGQLTPLRGSKLWQLAALNLWLSEQGI
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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