Pseudomonas taiwanensis DSM 21245, H620_RS0103340
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas taiwanensis DSM 21245 H620DRAFT_scaffold00006.6_C, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CGCTTCACGGTACGCCAATTTGAGAATGGCTCGACTCAGTTGGCGGTCTATCGTGGCTCGCTTCAGGTAAAACCGGCAAAAGCGAGCACGTGGACTCCCT TGCAGGCCGGGCAACTGGCTCGTTTCGGGCCGCTCGGGCTGCTCGATCAGGATGCACTGCAAGCAAACGCTCCGGCCTGGGCAAAAGGCATGATCGTCGC CAACGGCCAACCGCTCCAGGCTTTCCTGGATGAACTGGGTCGTTATCGTCATGGGCATCTCGGGTGCGACCCCGCATTGGCCAACCTGCGTGTATGGGGA TCCTACCCGCTGGCAGACAGTGATCGAATCATCGATGCCATTGCCCAGACACTGAAACTGGATGTCCAGCGTTTCACTCGCCTATGGGTCAACTTGCGCG CCTTGCCAGCAACCGTTTGAACTATTTTCGTCTTCGATGAGCCGTTTTGATTTCTGGCGAGACTTATAGGCCAAACATCAAAAACATCGGGGAACTTCAC
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| DNA Sequence for Gene |
>H620_RS0103340
ATGCATCACCGCAGTATTTCGTCGTGCTACGCAACCCCGCTCGCCAGCACCCTGGGTTGCGCCGCGGCGGTTCTGATTGCCAGTTCATCGGCAGTGTGGG CAGCCGCCGATAGCAGCGTGCAACACTACGAAATCCCCGCGGCGCCACTGGGCACTGCGCTCAGTCACCTGGGCCAGCAAGCCCATTTGTTGTTGTCGTT TCCCAATGAATTGATTGCCGGACAAACCAGCCCTGGCTTGAAGGGTGATTACACGGTCGACGGTGCGTTACAGGCGCTGCTTGAGGGCAGCCAGCTCATA GCGGTGCGCCAGCCGGATGGGCGATACACCCTCCAGCGAGCGCCGGCCTCTAACGTGCTGGAGCTTCAAAGCATTTCAATTTCGGGCAAAGCGCCCGGGT CGACTACAGAAGGTACCGGGCTCTACACCACCTACTCATCCAGCAGTTCGACCCGTCTGAACCTGACCCCCAAAGAGACCCCGCAGTCGCTGACCGTCAT GACCCGCCAGCGCCTGGATGACCAGCGCCTTACCAATCTAAGCGATACCCTCGATGCCACACCGGGCATCATCGTGTTGCGCGACGGGCTGGGTGCCGAA TCCGATGGTTACTTCTCACGCGGCTTCGAGGTTCAGAACTTTGAAATCGATGGTGTGCCCACCGTCAAGCGCATGGACAATTACACCCAGAGCATGGCCA TGTATGACCGGGTGGAGGTGGTGCGCGGTGCTACCGGCCTGATCAGCGGCCTGGGCAGCCCTTCAGCGACGATCAACCTGATCCGCAAGCGTCCGACCTC CGAGGCTCAGGCCAGCGTCACCGCAGAAGCGGGTAACTGGGACCGCTACGGAACTGGCTTTGATGTATCTGGCCCGCTGACCGAAACCGGCAACGTACGC GGTCGTCTGGTCGCCGATTTCAAGACAGAGCAGTCATGGGTAGACCGCTACAAACAGGACTCGCAGCTGATCTACGGCATTACCGAGTTCGACCTGACTG AAGACACCCTGCTGACGATGGGCTTCAGTTACCAACGCACAGACGTTGACTCGCCCATGCGCTCCGGCCTGCCGACCCGCTTCACCGACGGGTCTCGCAC CAACCTCAAACGCTCACTCAATTCGGCTCAAACGTGGTCTTACAACGACCATGAGCAAACCAGTTTTTTCACCTCGATCGAACAGCAGTTCGCCAATGGC TGGAGCGGAAAGATCGAGCTGACCCACTCCGAAAACAAGTTTGATGAAGTCTTCAACTACGTCAACGGCAGCCTCAACCCGGACGGAAGCGGCACCACAC AGTTGCCCGTGCGCTTCTCCGGCATCCCCCGCCAGAACAACATCGATGCCTACCTGACCGGCCCGTTCAGTCTGTTGGGCCGCGAGCATGAATTGATCGC CGGCGTGACCTTGTCCAACTACTACGAGGACGTGCCAAGCTACGGCGGCTGGAAATACGACTATTCCGGCTCTCCGGCTGGCGCAATCGATAACCTGTTG AACTGGAACGGCGGCTCGGTCAAACCGGAATTCGACGTCACTGGCAAATCCACTGCCGACGAAACTCAATACGCCGCTTATCTCGCCACGCGCCTGCACG CCACCGACGATCTCAGTGTCTTGCTGGGTAGCCGCGTGATCGATTGGCATCGCGACACCGAGGATAAACCCTACAACGCCGAGCAAACCAAGACCAAGGA GTCGGAAACCGGCGTGTACATCCCGTATGCTGGCGTGGTGTATGACGTCAACGATACGTGGTCGCTGTATGCCAGTTATACGAAAATCTTCAACCCACAA TCGTCCTGGGTTCGCGACATCGACAACAAACCTCTGGATCCGATGGAGGGCACCGGATATGAAGTCGGCGTCAAGGGAAGCCACTTCGACGGCAAGCTGA ACTCCAGCGTCGCGCTGTTCAAGATCGAGCAGGACAACCTGGCAATCTGGATCGATACTCCAGGCGGTAACACGTACAAGTCGGAACAGGGAACCACTAC CAAAGGCGCTGAATTCACCCTGGACGGAGAGCTGGCCGAAGGCTGGCAGGCATCTGCCGGTTATGCCTATGCGGTCAGCACCGACGCTGACGACCAGCGT ATCGTTACCACCCTGCCTCGCCACAGTCTCAAGACTTTCACCCGCTATCGCCTGCCGGGGATTCTGGACAAGCTCACCCTTGGCGGCGGTGTGAACTGGC AGAGCAAAACCGGTGCCGACCTGCACACCTTCACCCAGGGTAGCTATGCCGTCACCAACCTCCTGGCTCGCTACGACTTCAACCAGCATCTAAGTGCGTC AGTCAATCTGAACAACGTGTTCGACCGTGAATACCTCAGCTATGCCGGCGACCACGGTATGTACGGTGCTCCAAGAAACATCATGACGGGTTTCAAGTAC AACTTCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
CGTTCGCGCGCTTCGTGCTGGGCGATGGGTCGATAGCAACGACCGCCTTACAGGCCGAGCATGGCATGCCTGCCAAGTTGGGTAAAAATGCCGGAGAGTG CGCAATGGACGGTGGGAGAGCAGGTTCGCCCACGAAGCAGGCCGCGCGGTGAATGGCGAGGGCTTCGCCCGTGTTTGCGGGTGAACCCGTTCCTACAAAG ATTACTGCCGACCTCACAGACCTCTGCAGTATGAAAAATTCACGGAGTAGCATACCGAACTGGAAAAGCTACTATCAGTAGGTTACCTTTAGTAGCTAAA GCGCGGTCGCTTCTACATCGAGGACCACGCGTCCTCTGTCGGAGAACCGATCATGCACAGTTTAATCGTCGTCGCCCATCCCGATCCGCGTTCTTTGACC CATGCCATCGCCCAGCACATCGTCCACGGCATCACGGCCTCTAACCCACACAACAGCGCAGAGTTTGCCGATCTCGTCGCCGAGGGCTTCGACCCGCGTT
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| Amino Acid Sequence |
>ferric-pseudobactin BN7/BN8 receptor
MHHRSISSCYATPLASTLGCAAAVLIASSSAVWAAADSSVQHYEIPAAPLGTALSHLGQQAHLLLSFPNELIAGQTSPGLKGDYTVDGALQALLEGSQLI AVRQPDGRYTLQRAPASNVLELQSISISGKAPGSTTEGTGLYTTYSSSSSTRLNLTPKETPQSLTVMTRQRLDDQRLTNLSDTLDATPGIIVLRDGLGAE SDGYFSRGFEVQNFEIDGVPTVKRMDNYTQSMAMYDRVEVVRGATGLISGLGSPSATINLIRKRPTSEAQASVTAEAGNWDRYGTGFDVSGPLTETGNVR GRLVADFKTEQSWVDRYKQDSQLIYGITEFDLTEDTLLTMGFSYQRTDVDSPMRSGLPTRFTDGSRTNLKRSLNSAQTWSYNDHEQTSFFTSIEQQFANG WSGKIELTHSENKFDEVFNYVNGSLNPDGSGTTQLPVRFSGIPRQNNIDAYLTGPFSLLGREHELIAGVTLSNYYEDVPSYGGWKYDYSGSPAGAIDNLL NWNGGSVKPEFDVTGKSTADETQYAAYLATRLHATDDLSVLLGSRVIDWHRDTEDKPYNAEQTKTKESETGVYIPYAGVVYDVNDTWSLYASYTKIFNPQ SSWVRDIDNKPLDPMEGTGYEVGVKGSHFDGKLNSSVALFKIEQDNLAIWIDTPGGNTYKSEQGTTTKGAEFTLDGELAEGWQASAGYAYAVSTDADDQR IVTTLPRHSLKTFTRYRLPGILDKLTLGGGVNWQSKTGADLHTFTQGSYAVTNLLARYDFNQHLSASVNLNNVFDREYLSYAGDHGMYGAPRNIMTGFKY NF
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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