Pseudomonas taiwanensis DSM 21245, H620_RS0102110
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas taiwanensis DSM 21245 H620DRAFT_scaffold00005.5_C, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CGAGCTGCCACACGATGCAGCTTTCTTCATTGCCCAGCGTATCCGCTCCAACGTGCGTGAACTCGAAGGTGCCCTCAAGCGTGTGATCGCTCACTCGCAC TTCATGGGTCGCGACATCACCATCGAACTGATTCGCGAGTCGCTGAAAGACCTGCTGGCGCTGCAGGACAAGCTGGTCAGTGTGGATAACATTCAGCGTA CCGTTGCCGAGTACTACAAGATCAAGATCGCCGATTTGTTGTCCAAACGCCGATCGCGCTCTGTTGCACGTCCGCGTCAGGTGGCCATGGCCTTGTCCAA GGAGCTGACCAATCACAGTCTGCCGGAAATCGGCGATATGTTTGGTGGCCGGGACCATACCACCGTGTTGCACGCCTGCCGCAAGATCAACGAATTGAAG GAATCCGACGCGGACATCCGCGAGGACTACAAGAACCTGCTGCGGACGCTGACGACCTGATGGCCGTCAGCGCAGCTATTTGAAGGCAAGGGACTAGACC
|
|
| DNA Sequence for Gene |
>H620_RS0102110
ATGCATTTCACCATTCAACGCGAAGCCCTGTTGAAACCCCTGCAACTGGTCGCCGGTGTCGTCGAGCGCCGTCAGACCTTGCCGGTCCTGTCCAACGTTC TGCTGGTCGTGCAAGGCCAGCAGCTTTCGTTGACGGGTACCGACCTGGAAGTCGAACTGGTAGGCCGCGTGCAACTGGAAGACTCGGCTGAGCCTGGCGA AATCACTGTTCCAGCGCGCAAGCTGATGGACATTTGCAAAAGCCTGCCGAACGATGCCCTGATCGATATCAAAGTCGACGAACAGAAACTGTTGGTAAAG GCCGGCCGCAGCCGCTTCACCCTGTCGACCCTGCCGGCCAACGACTTCCCGACCGTGGAAGAAGGCCCAGGCTCGCTGACCTGCAACCTGGAGCAAAGCA AGCTGCGCCGCCTGATCGAGCGCACCAGTTTCGCCATGGCTCAGCAGGATGTGCGCTACTACCTCAACGGTATGCTGCTGGAGGTATCCAGCGGTACGCT GCGTGCTGTCGCGACCGATGGCCACCGTCTGGCGATGTGCGCGATGAGTGCACCGATCGAACAGGCCGACCGCCACCAGGTGATCGTGCCACGCAAGGGT ATCCTTGAGCTGGCGCGTTTGCTGACCGAGCCGGAAGGCATGGTCAGCATCGTCCTCGGTCAGCACCACATCCGTGCGACGACCGGCGAGTTCACCTTCA CCTCCAAGCTGGTCGACGGCAAGTTCCCTGACTACGAACGCGTCCTGCCCAAGGGGGGGGACAAGTTGGTTATCGGCGATCGCCAGGCGCTGCGTGAAGC GTTCAGCCGTACTGCGATCTTGTCCAACGAGAAGTACCGCGGTATTCGCCTGCAACTGGCCGCTGGCCAACTGAAGATTCAGGCCAACAACCCTGAGCAG GAAGAAGCTGAAGAAGAAATCAGCGTCGACTACGACGGCAGCTCGCTGGAAATCGGTTTCAACGTCAGCTACCTGCTGGACGTGCTGGGTGTGATGACGA CTGAACAGGTCCGCCTGATTCTGTCCGACTCCAACAGCAGTGCCCTGCTGCAGGAAGCCGGCAATGACGACTCGTCCTACGTTGTCATGCCGATGCGTCT GTAA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
ACGTAGCAGGCCCAATGTCCCTTCGACGTATCATGGTCACCGCGGTGCGCAACCTGCACCCGGTGACCCTCTCACCTTCCCCACGCATCAATATCCTTTA CGGCACCAACGGCAGCGGCAAAACCAGCGTGCTTGAAGCCGTGCATTTGCTTGGACTGGCGCGCTCGTTTCGTAGTACCCGGCTCAACCCGGTCATCCAG TACGAACAGCCCACTTGCACGGTGTTTGGCGAAGTCGAGCTGACGGAAGGTGGCACCAGTAACCTGGGGATATCCCGTGATCGGCACGGGGAGTTCACCA TTCGCATCGATGGGCAGAATGCCAAGAGTACGGCTCAGCTTGCCGAGCTCTTGCCACTGCAATTGATCAACCCCGACAGTTTTAGGCTGCTCGAAGGTGC TCCGAAGATCCGCCGGCAGTTTCTGGACTGGGGCGTGTTTCACGTGGAACCACGCTTCATGGCAGCTTGGCAGCGTCTGCAGAAGGCGCTGCGGCAGCGG
|
|
| Amino Acid Sequence |
>DNA polymerase III subunit beta
MHFTIQREALLKPLQLVAGVVERRQTLPVLSNVLLVVQGQQLSLTGTDLEVELVGRVQLEDSAEPGEITVPARKLMDICKSLPNDALIDIKVDEQKLLVK AGRSRFTLSTLPANDFPTVEEGPGSLTCNLEQSKLRRLIERTSFAMAQQDVRYYLNGMLLEVSSGTLRAVATDGHRLAMCAMSAPIEQADRHQVIVPRKG ILELARLLTEPEGMVSIVLGQHHIRATTGEFTFTSKLVDGKFPDYERVLPKGGDKLVIGDRQALREAFSRTAILSNEKYRGIRLQLAAGQLKIQANNPEQ EEAEEEISVDYDGSSLEIGFNVSYLLDVLGVMTTEQVRLILSDSNSSALLQEAGNDDSSYVVMPMRL
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|