Pseudomonas taiwanensis DSM 21245, H620_RS0124460
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas taiwanensis DSM 21245 H620DRAFT_scaffold00004.4, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GCGGCAAGGGCACTGCGGACGAGAAGTTCGCCGCCCTGCAGGACGCAGGTGTGAAAACCGTGCGTTCCCTGGCTGACATCGGCAAGGCCCTGGCCGAGCT GACTGGCTGGGAAATGAAGAAGTAATACGCTTTACCCCCCACGCGCACAGAGGCCACCTTCGGGTGGCCTTTGTCGTTATGAGGGGGAGGTCTTTTCTCG GTGCGGAAAATTCGATCGCCTCGATCAGGTTTTTCCACCAGACATTTGCCCGATTCAGCAATAAATTATCGCCTGAGACAGATATCCAGACGACAAACAC ATACGCACATCGGACAAGCAGCACTGTATCAGTGCGTTTGCCCGGTAAAACGGTTAATCTACGCGCTCACTCTGTGCCCGTACCCCAAAAGGGAACGACA CGCTAAACGGGTCTGGCCTACCAAGCCGGGCAGCATTTCCCTCACCCATTGGGAAATCCCCTCTCGAATCCCGATTTCAGCAGTGTGGTACTTCCTTAAA
|
|
| DNA Sequence for Gene |
>H620_RS0124460
ATGAAAGTGTTAAAAGGCCAGGATATCCTGGCGCTTGGCTTTATGACGTTTGCGCTTTTCGTAGGCGCCGGCAATATCATCTTCCCGCCCATCGTCGGCC TGCAGTCGGGTCCGCATGTATGGATGGCGGCCCTGGGCTTCCTGGTTACAGCGGTTGGCCTGCCGGTGATCACCGTGGTTGCCCTGGCCAAGGTCGGTGG TGGCATGGACGCGCTGAGCAGCCCGATCGGCAAGTTCTTCGGTGGCTTGCTGGCAGCCGTGTGCTACCTGTCGGTCGGCCCGCTGTTCGCCACCCCGCGC ACCGCGACCGTGTCGTTCGAAGTAGGCGTGGCGCCGCTGACCGGTGAAAGCCCCATGGCGCTGTTCATCTACAGCCTGGTGTACTTCGTGGTGGTACTGG CCGTGTCCATGTACCCTGGCAAGTTGCTCGACACGGTCGGCCGCTTCCTCGCCCCGCTGAAGATCATTGCCCTGGCGGTGCTGGGCATCGCCGCGTTCGC GCTGCCGGCCGGCACCATCGGTGAGGCGCAGCCCGCCTATGCCGCTGCCGCGTTCTCCAAAGGCTTCTCCGATGGCTACCTGACCATGGATACCCTCGGT GCGTTGGTGTTCGGTATCGTGATCGTCAACGCCATTCGCTCGCGTGGTGTCGAGTCGCCTAAGTTGATCACTCGCTATGCCATCATTGCGGGCCTTATCG CCGGTGTCGGCCTGGCGTTGGTCTACGTCAGCCTGTTCCGCCTGGGTGCGGGCAGTCATGAGATCGCGGCGGGCGCCACCAACGGTGCGGCGGTACTGCA CGCCTATGTGCAGCACACCTTCGGCTCGCTGGGCAGCGGTTTCCTGGCCGTGTTGATCGCCTTGGCGTGCCTGGTGACCGCGGTCGGCCTGACCTGTGCG TGTGCCGAGTACTTCAGCCAGATTCTGCCGTTGTCGTACCGTGCATTGGTGGTGATCCTGGCGGGCTTCTCGCTGCTGATCTCCAACCTTGGCCTGACCA AGCTGATCATGTTCTCGATCCCGGTGCTGACCGCGATCTACCCACCGTGCATCGTGGTGGTAGGCCTGAGCTTCGTGAAGGATCTGTGGAATTCGCCGAC TCGCATCCTGGCGCCGGTCATGCTGGTATCGCTGGTGTTCGGTATCGTCGATGCAATCAAAGGCAGCAGCATCGCCCACGTACTGCCGGACTTCATGGCT CACCTGCCGTTCAGCGACGAGGGCATGGCCTGGCTGGTGCCTTCGGTCCTGACCCTGGCAGGCGCCGTGGTCTGCGACCGTATGCTGGGCAAGCCGCGCG AGGCGCTGGCCTGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
TGTGTTGATGCCTGATCGCGGCACCGGCCACAAGCCATAGGGTGTTGCCAGAGGCCCAGACCTGAAGCCCCGTGTCCGAGAGGATGCGGGGCTTTTGTTT GCATCGAGTGGCATCGGCAGAAAAACATTTTGACCCGACGGTGTGCCTTTCCGGGCTTGCAGGCGTCGAAATGCCGTCTCTATTCTTTGTGCACCTGGCG TTCGGGAACTCTGCATGAACTTCATTCAAAGCAACATCTACAACCTGCTGGCCATCGGCTGGTTTGCCCTGTGTTGGGGAGGCTATACCCGTTACGCCAT CTGGAAGGGCCGTGATACGGCGTGCCTGGCCAGTGTCCTGCATTTGTATCGCGAGGACTGGATGCGCCGCATGCTGCTGCGTGACAACCGTATCGCGGAC GCCAGTGTGATCGGCAATCTTGAGCGCAATGCCTCGTTCTTCGCCTCCAGTACGCTGATCATCCTGGCCGGCATCCTTACGGTGCTCGGGGCGTCGGATC
|
|
| Amino Acid Sequence |
>branched-chain amino acid transport system II carrier protein
MKVLKGQDILALGFMTFALFVGAGNIIFPPIVGLQSGPHVWMAALGFLVTAVGLPVITVVALAKVGGGMDALSSPIGKFFGGLLAAVCYLSVGPLFATPR TATVSFEVGVAPLTGESPMALFIYSLVYFVVVLAVSMYPGKLLDTVGRFLAPLKIIALAVLGIAAFALPAGTIGEAQPAYAAAAFSKGFSDGYLTMDTLG ALVFGIVIVNAIRSRGVESPKLITRYAIIAGLIAGVGLALVYVSLFRLGAGSHEIAAGATNGAAVLHAYVQHTFGSLGSGFLAVLIALACLVTAVGLTCA CAEYFSQILPLSYRALVVILAGFSLLISNLGLTKLIMFSIPVLTAIYPPCIVVVGLSFVKDLWNSPTRILAPVMLVSLVFGIVDAIKGSSIAHVLPDFMA HLPFSDEGMAWLVPSVLTLAGAVVCDRMLGKPREALA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|