Pseudomonas taiwanensis DSM 21245, H620_RS0123105
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas taiwanensis DSM 21245 H620DRAFT_scaffold00003.3, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GGCGATGGCCATAGTCGAAGCGAGGGTTACCATGCCACTGGTTCACACCCGGACGGGGATGAGGCCTGTAGTACGGTGCAGGCGCTGGCCGGTAATAGCG TGGCGCTGGCTGATAGTAGTAGCGCGGTTGTGGCGTTACATAGTAGCGGTCATAACGGTAGTACCCCGGCGACACGTAGCGATCGGAGGAGTAGTAATCC GAGCGGTAATAGCCCCCACTCTCGTAGTAGGGCACGCAGGCGGACGTCATCAGGCCCAGCAGGGCGATCAGCAGAATTCGATAGGACATGGCGGCCTCCT GGACCGCAGGGGTGCCCGAACAGCGGCGCTGGCGAGCGTCGACGAGAAGCGATCGTCGACAACCAATAAGACCGTCCAGTCGGGGTGCAGTGCCATTTTC GCAACAAATTGAAACAGGTCCGAGTACCCCCAAAAAAGATGCAGTCATTTCTCGGGCATCTCACTAGAATGGGCAGCTCGGCACACATCACGGGACGATC
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| DNA Sequence for Gene |
>H620_RS0123105
ATGCCTCCACGCTCCGCCCTGTTTTCACAGCGCTCGCTGATCCTCACCCTGCTGGTGCTGCTGGCCTGCGGCTTCCTGGCCACCTCGCTGCTCAGCTACT ACTCCTCGCGTAGCGCCATCCATGACGGAATCGTCCATACCGAACTGCCGCTGACGTCCGACACGGTCTACTCGGAAATCCAGAAAGACCTCATTCGCCC TGTACTGATCGCCTCGATGATGGCCCAGGACACCTTCCTGCGCGACTGGGTGCTGGCCGGCGAACAGGACACCCGGCGCATCACCCGTTACCTGGGCGAA GTCATGGGCAAGCAGGACACCTGCACCTCGTTCTTCGTCTCCGACCGCAGCCTCACTTACTACCAGGCCAAAGGCGTACTCAAGCAAGTCCAGCCCGGCA CCTGGCGCGATGAATGGTATTTCCGCCTGCGCGAGCTCAAGGCCCCTTACGAGATCAACGTCGACCTGGACATGGCCAACCAGGACAGCCTGACGGTGTT CATCAACTATCGCGTGCTGGACTACCAGCAACGCTTCATCGGCGCGGCAGGTGTGGGGCTCAGCGTGGCGTCGGTGGTCAAGCTGATCGACAACTACCAA CGGCGCTATCAGCGCTCGGTGTTCTTCACCGATGCCCAAGGCAAGATCCTGCTGACCGGCTCCGATGGCGGTCCTCATGGCTTGCGCGTCGGACAGATGC TCGGCGACAGCGGCGACTTCGCCGCGCTGCTGGCGCAAGCCGCGGTGCCTGACGAAGGCAGCCACGAATATCAGGATGGCGCTGGACACAGTCACTTCCT CAACGTGCGCAAACTGCCTGAGCTGGACTGGTACCTCCTGGTGGACAAGCGCGAGACCGGCACGCTGGACCGCGTCCGCCATGCTCTTTACCTGAATTTG GCGATCTGCGCGATGATCACCCTGGTGGTGCTGTCGTTGCTCAATGCAATGCTCCAGCGGCACCAGGCCAGCACGACCGCGTTGGCCACGCTCGACAGCC TTACCGGCCTGCCCAATCGACGCAGTTTCGACCTACTGGCCGCCCAGGCATTGCTGGAAGCCCAGCGTGACCGGGCGCCACTGGTGGCGCTGCTGATCGA CCTGGACCACTTCAAGGCGCTCAACGACACCCACGGCCACCTGGCAGGCGACGAAGTGTTGCGCCAGTTCGCCCAGGTGCTGCAAGGCAGCCTGCGCCAG TCGGATATAATCTGCCGCTGGGGCGGTGAGGAGTTCATCGTGTTGCTGCGCGAGGCCAACGGTCGCCAAGCCATCGAAGTGGCCGAGAAGATCCGCCGAC GCACCGAACAATTGACGTTCACCTACGAAGACCAACCGCTACGCCTGACCACCAGTATCGGCCTGGGCAACCTTCAGCCGGGCGACACCGTCCATACCCT GCTGACCCGCGCCGACCGAGCGCTTTACCGTGCCAAGCAGGCCGGTCGCAACCGCGTCTGCACTGAAATCCCCGGATCCGACCATGAATGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
CAAGCAGCACTGCCCCGCCTGTGGCGCCCCCAACCAGTGCACCTTGGCCGATCCACGCAGCGCCACCCAGGCTTGCTGGTGCTTTGGCGTGGCCATCGAC CCCGCCGTGCTCCAGGCCCTGCCCGCCGAGCTGCGCGACAAGGCCTGCCTGTGTCCACGCTGTGCCGGTGTTCTGGCACAACTCGAAGCAGCGCCCGACT CGCCAACGCGCTAGACTGCCCCCCCGCTGTTATCCCTGCCGTGCCTCATGCGACTTGACCGTTTCCTCGCCAATCTCCCCGACTACAACCGTCAGCAGGT GCGACGACTGCTGGCACAACGACGTGTGCGAGTGAATGGCGAGGTGGCGCATGACCCACTGCTGGAAGTGAACGACTTCAGCCGCATCGAAGTGGACGAC AAGTTGCTTCAGGCAGGCTACCCGGCTCGCTACCTGATGCTGCACAAGCCCACCGGTTGCGTCAGCGCCACACAGGACCCTCGGCACCGCACGGTGCTGG
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| Amino Acid Sequence |
>Diguanylate cyclase
MPPRSALFSQRSLILTLLVLLACGFLATSLLSYYSSRSAIHDGIVHTELPLTSDTVYSEIQKDLIRPVLIASMMAQDTFLRDWVLAGEQDTRRITRYLGE VMGKQDTCTSFFVSDRSLTYYQAKGVLKQVQPGTWRDEWYFRLRELKAPYEINVDLDMANQDSLTVFINYRVLDYQQRFIGAAGVGLSVASVVKLIDNYQ RRYQRSVFFTDAQGKILLTGSDGGPHGLRVGQMLGDSGDFAALLAQAAVPDEGSHEYQDGAGHSHFLNVRKLPELDWYLLVDKRETGTLDRVRHALYLNL AICAMITLVVLSLLNAMLQRHQASTTALATLDSLTGLPNRRSFDLLAAQALLEAQRDRAPLVALLIDLDHFKALNDTHGHLAGDEVLRQFAQVLQGSLRQ SDIICRWGGEEFIVLLREANGRQAIEVAEKIRRRTEQLTFTYEDQPLRLTTSIGLGNLQPGDTVHTLLTRADRALYRAKQAGRNRVCTEIPGSDHE
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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