Pseudomonas taiwanensis DSM 21245, H620_RS0122965
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas taiwanensis DSM 21245 H620DRAFT_scaffold00003.3, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CTGTGCCTGGCAGCGCTGTACGAAAGCTGGTCGATCCCGATCGCCGTCGTGTTGGTCGTACCGCTGGGTATCATCGGTGCGCTGATCGCCACCAGTCTGC GCGGCTTGTCGAACGACGTGTACTTCCTCGTGGGCCTGTTGACCACCATCGGCCTGGCGGCGAAGAACGCGATCCTGATCGTCGAGTTCGCCAAGGAACT GCACGAGCAGGGCCGCAGCCTATACGATGCGGCGATCGAGGCGTGCCGTATGCGTCTGCGTCCGATCATCATGACCTCGCTGGCGTTCATCCTCGGCGTG GTACCGTTGACCATCGCCAGCGGCGCGGGCGCCGGCAGCCAGCACGCCATCGGCACGGGCGTGATCGGCGGCATGATCAGTGCGACCGTACTGGCCATCT TCTGGGTACCGCTATTCTTCGTCGCAGTGTCGTCGCTGTTCGGCAGCAAAGAACCGAAACAAGACGCCACCCCTGAAACTCCACGTTATGAGGCTGGGCA
|
|
| DNA Sequence for Gene |
>H620_RS0122965
ATGACCAAGTCTTTATTGACCCTGGCGGTAACCGCTTTCATTCTCGGCGGCTGCTCGCTGATCCCTGACTACCAGCCCCCGGAATCTCCGGTGGCAGCGC AGTGGCCGCAAGGCCCTGCGTACTCGCCTACCCAATCGGCCGAGGTAGCCGCCGCCGAGCAGGGCTGGCGCCAGTTCTTCCACGACCCGGCACTGCAGCG ATTGATCCAGACCTCCCTGGAGAACAACCGCGACCTGCGCGTGGCGGCGCTGAACATCGACGCCTACCGCGCGCAATACCGCATCCAGCGGGCCGACCTG TTCCCAGCGGTTTCGGCCACTGGCAGCGGCAGCCGCCAGCGGGTGCCGGCGAACATGTCGACCACCGGTGAAGCCGGGATCAACAGCCAGTACTCGGCTA CGCTGGGTGTCAGCGCCTACGAACTGGACCTGTTCGGTCGAGTGCGCAGCCTGACCGAGCAGGCCCTGGAAACCTACCTGTCCAGCGAGCAGGCACGTCG CTCCACGCAGATCGCCCTGGTGGCCAGCGTGGCCAATGCCTACTACACCTGGCAGGCCGACCAGGCGCTACTCAAGCTCACCGAAGAGACCCTCAAGACC TACGAGGAAAGCTACAACCTGACTCGCCGCAGCAACGAAGTCGGTGTGGCTTCCGCGCTCGATGTCAGCCAGGCACGCACCGCCGTGGAAGGCGCCCGGG TCAAGTACTCGCAGTACCAGCGCCTGGTCGCCCAGGACGTCAACAGCCTGGCGGTGCTGCTCGGCACCAGCATTCCGGCCGACCTGCCTAAGCCGCTGGA GCTCAATGCCGACCAGCTGGCCGAGGTACCGGCCGGCCTGCCATCGGACATCCTCCAGCGCCGTCCGGACATCCAGGAAGCCGAGCACCTGCTCAAGGCC GCCAACGCCAACATCGGCGCGGCTCGGGCCGCGTTCTTCCCGAGTATCAGCCTGACCGCCAACGCAGGCAGCCTAAGCCCGGACATGGGTCACCTGTTCT CGGGCGGCCAAGGCACCTGGCTGTTCCAGCCGCAGATCAACCTGCCGATCTTCAACGCCGGCAGCCTGAAGGCCAGCCTGGACTACTCCAAGATCCAGAA GGACATCAACGTCGCCAAGTACGAAAAGACCATCCAGACCGCCTTCCAGGAAGTCTCCGATGGCCTGGCGGCGCGCAAGACCTTCGAAGAGCAGTTGCAG GCACAGCGTGACCTGGTGCAGGCGAACCAGGATTACTACCGCCTGGCCGAGCGTCGCTACCGTATCGGTATCGACAGCAACCTGACCTTCCTCGATGCCC AGCGCAACCTGTTCAGCGCCCAGCAAGCCCTGATCAGCGACCGCCTCTCGCAGCTGACCAGCGAGGTCAACCTGTACAAGGCTCTGGGTGGGGGCTGGTA CGAGCAGACCGGACAAGCCAACCAGCAAGCTTCGGTGGAAACACCGAAAAGCTGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
GTCGACAGCTAAAACATCAAGCCCACCTTCGCAGTGGGCTTTTTGTTGCGACCTGGCCGTATCGACCCCATCGACTGCGGACAATTAACCAGCTGGAACA TTCCGTTCGATTATCGCCCGCTTCCGTTTGCGACCAATTGCCCCACCCTCCCCCGATTCAGCACCATCTGCCCCGAAACGCTGCACACGTTCATCAGAAA AAGACCCGCCCCTGCACACGTGTCCCTGCAGCGCGCCGGTTCGCCCCATAAAAACAAGAGATTGACAACAGATGAGCACTTCGTACCCCGCACGCCAGCT GCTGCCCGGCCTGTTGGCCATGTCCTGCGCCTTCCCTGTTCTGGCCGCCGAAGGCGGTTTCGTGGAGGATGCCAAGGCCACACTTAACCTGCGTAACTTC TACATCAATCGCAATTTCGTCGACTCGGCCCACCCACAAGCGAAGGCCGAAGAGTGGACGCAAAGCTTCATCCTCGACGCCCGTTCCGGTTTCACCCAGG
|
|
| Amino Acid Sequence |
>multidrug transporter
MTKSLLTLAVTAFILGGCSLIPDYQPPESPVAAQWPQGPAYSPTQSAEVAAAEQGWRQFFHDPALQRLIQTSLENNRDLRVAALNIDAYRAQYRIQRADL FPAVSATGSGSRQRVPANMSTTGEAGINSQYSATLGVSAYELDLFGRVRSLTEQALETYLSSEQARRSTQIALVASVANAYYTWQADQALLKLTEETLKT YEESYNLTRRSNEVGVASALDVSQARTAVEGARVKYSQYQRLVAQDVNSLAVLLGTSIPADLPKPLELNADQLAEVPAGLPSDILQRRPDIQEAEHLLKA ANANIGAARAAFFPSISLTANAGSLSPDMGHLFSGGQGTWLFQPQINLPIFNAGSLKASLDYSKIQKDINVAKYEKTIQTAFQEVSDGLAARKTFEEQLQ AQRDLVQANQDYYRLAERRYRIGIDSNLTFLDAQRNLFSAQQALISDRLSQLTSEVNLYKALGGGWYEQTGQANQQASVETPKS
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|