Pseudomonas taiwanensis DSM 21245, H620_RS0100790
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas taiwanensis DSM 21245 H620DRAFT_scaffold00002.2_C, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CCTGGCAGGCTGTGCAGGAGCAGGGTCTGGCCAGGCTTGCCGGCCAGGTCGCCACGCTTGAGCAGGGCAGCAATGGCGCCGTCGGAGGCTTGGTCGACGG CCTTGGCGACAGCGCCGAGCTTACGACCTTCGCCTACTGGTACGACCAGCGTTGCGGTTTTCACAGATGCAGCAGCTACGCTTTTTACAACCAGTTCCAT GTCAGGGTCCCCGAATGATCTTTACCGTAGGCGCTGAATGTTCGCGTGCGCCGGGCAGGCTTGGCCGCGTGGTCGCGTGCCAGTGGAAAAGCTGCCAGTT TGAGCCTGCGACAAGCGTGCTGACAACCCCGACGTGCGGCTTCATGCGCGGCCAAGTGACAGGCGCGGTCAATCACAGGATAATGCGCGCACTTTTATGG AGGTTCGCCTTTGGCGAACCAGCATTGGTCTGGCTGTACTACGTCATAGTCTGGCGCCATTGTTTGGCAGTCCGCCCCTGACAACCCAGGAGTGTCTGGT
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| DNA Sequence for Gene |
>H620_RS0100790
TTGATCGTCTTTCGTTATCTGTCCCGCGAGGTCCTGGTGACCTTGAGCGCCGTCAGCGCTGTGCTGCTGGTGATCATCATGAGCGGGCGCTTCATCAAGT ACCTGGCCCAGGCCGCCCAAGGCGTGCTCGACCCGAGTGTACTGTTCCTGATCATGGGTTTCCGCCTGCCGGGTTTCCTGCAGCTGATTCTCCCACTGGG CCTGTTCCTCGGCATCCTGCTGGCCTATGGCCGGTTATACCTGGAAAGCGAGATGACCGTGCTGTCGGCCACCGGCATGAGCCAGCAGCGCCTGCTGGGC CTGACCATGGCCCCGGCGGCGCTGGTGGCATTGCTGGTCGCGTGGCTGAGCCTGAGCCTTGCGCCGCTGGGCGTTGCCCAGGTGCAGCAAATCATCAGCC AGCAGGACGCGCTGACCGAATTCGACACCCTGGTGCCGGGGCGTTTCCAGACCTTGCGTGATGGCTCGCGGGTGACCTACACCGAGCAGCTTTCGGACGA CCGCATCAACTTGGGTGGCGTGTTCATCTCCGAGAAACGCTTCAACCAGGACAAGACCAAGGACCGCGCTCCTTCGGTGCTGGTCGCCGAGAAAGGTCAC CAGGAAGTGCAGGCCGACGGCAACCGCTACCTGATCCTGGAAAATGGCTATCGCTATGACGGCAACCCTGGCCAGGCTGACTACCGTGCCATCAAGTACG ACACCTACGGCGTATTGCTACCCAAGCCTGAAGTCAGCGAGGAAGTGACCGAGCGCGAAGCGATCCCGACCTCCCAACTGATCGGCCAGAAAGGCCTGCG TGAGCGCGCCGAGCTGCAATGGCGTCTGTCGCTGCCGATCCTGGTGTTCATCGTGACCGTGCTGGCAGTGCCGCTGGCCAAGGTCAACCCACGCCAGGGC CGCTTCCTCAAGCTGCTGCCGGCGATTCTTCTGTACATGGCCTACCTGACGATGCTGATTTCCGTACGTGGCGCCCTTGAGAAGGGCAAGTTGCCGATTG GCCTGGGTATCTGGTGGGTGCATGGACTGTTCCTGCTCATCGGCCTGGGCCTGATGTATTGGGAACCGCTGCGTCTCAAGCGCGCTGCCCGTCGTGCGGA GGTGGCCCATGGCTAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GCTCGATCGCTATATCGGCCAGAGCGTGCTGCTGGCCATTCTGGCGGTGCTGGGGATCATCCTCGGCCTGGCCTCGCTGTTTGCCTTCATCGACGAGATG GGCGACCTGAGCGACACCTACACGGTGATGGAGGCAGGTAACTTCGTCCTGCTGACCGCACCGCGTCGTCTGTACGAAATGCTGCCGATGGCCGCGCTGA TCGGCTGCCTGGTCGGCCTGGGCAGCCTGGCCAGCAGTAGTGAGCTGACCATCATGCGCGCCGCTGGCGTTTCCATCGGCCGTATCGTCTGGGCGGTGAT GAAGCCGATGCTGGTGCTGATGCTGGTGGGCCTCCTGATTGGCGAGTACGTGGCGCCGGTCACCGAAAACAAGGCCCAGGCCGACCGTTCCCTGGCCCAA GGCGGGGGAGAGGCACAAAGTTCCAAGCGCGGCATGTGGCACCGTCAGGGTGACGAGTTCGTGCACATCAACGCCGTGCAGCCCAACGGCCTGCTGCTGG
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| Amino Acid Sequence |
>permease YjgP/YjgQ family protein
MIVFRYLSREVLVTLSAVSAVLLVIIMSGRFIKYLAQAAQGVLDPSVLFLIMGFRLPGFLQLILPLGLFLGILLAYGRLYLESEMTVLSATGMSQQRLLG LTMAPAALVALLVAWLSLSLAPLGVAQVQQIISQQDALTEFDTLVPGRFQTLRDGSRVTYTEQLSDDRINLGGVFISEKRFNQDKTKDRAPSVLVAEKGH QEVQADGNRYLILENGYRYDGNPGQADYRAIKYDTYGVLLPKPEVSEEVTEREAIPTSQLIGQKGLRERAELQWRLSLPILVFIVTVLAVPLAKVNPRQG RFLKLLPAILLYMAYLTMLISVRGALEKGKLPIGLGIWWVHGLFLLIGLGLMYWEPLRLKRAARRAEVAHG
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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