Strain | Pseudomonas taiwanensis DSM 21245 H620DRAFT_scaffold00001.1, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
TTGCCGGCGATGGCCGCACCACTTGCAGCTAACTTCCACTGGTAGGCATTTATGGAACAACCCCTGAAGGTGATGGTGATCGACGATTCACGCACGATCC GCCGCACCGCGCAGATGTTGCTCGGCGAAGCGGGCTGCGAGGTGATCACCGCCAGCGACGGCTTCGATGCCCTGGTCAAGATCGTCGACCACCAACCGCA GATCATCTTCGTCGATGTGTTGATGCCGCGTCTGGACGGGTATCAGACCTGCGCCGTGATCAAGCACAACAGCGCCTACAGGGACATCCCGGTCATTCTG CTGTCGTCCCGCGATGGCCTGTTCGACAAGGCTCGCGGCCGGGTGGTCGGCTCGGACCAGTTCCTGACCAAACCCTTCAGCAAGGAAGAGCTGCTCGACG CGATCAGGGCGCATGTCCCTGGTTTCGCCGCGCCCGAACAACACGCACCCTGATCGCGCCCGCCATGGCGCCGTTTTCATTGTCCTGATGGGGAACCAGC
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DNA Sequence for Gene |
>H620_RS0120265
ATGGCCCGAGTTCTGATTGTCGACGATTCGCCGACAGAGATGTACCGATTGACCGAGTGGCTTGAAAAACGCGGCTACCAGGTGCTCAAGGCCAACAACG GTGCCGATGGTGTCGCCTTGGCCCGCCAGGAAAAGCCCGACGCGGTGCTGATGGACATCGTCATGCCAGGCATGAATGGTTTCCAGGCTACCCGGCAGCT CAGCAAGGACCCGGAAACCAGCGCCATCCCGGTGATCGTGGTCACCACCAAGGACCAGGAAACCGACCGCATCTGGGCCACGCGCCAGGGCGCCCGTGAC TTCCTGACCAAGCCCGTGGAAGAAGACGCACTGATCGCCAAGCTCAAAGAGGTGCTGGGCGCTTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
CCACCCGTCCGCAAGGCGCGTCGCTCACCGCTTTCGAGCTGTTGCTGGACATAGACCGGCGCTGCCGTTTGCTGGTGGCTGACCAGCCACCGCAGGATAC CCGCCTGCAACAGTGGAGCGGCATCGGCTTTCGCATTGCCGGACAATGGTTCGTAGCACCCATGGGCGAAGTCGCCGAAGTGCTGCGTGAGCCGCGCAGC AGTCGGGTGCCGGGCGTGCAGCCGTGGGTATGCGGTGTGGCCAATCTGCGTGGCCGGTTGCTGCCGGTCATGGACCTGAGCAGCTTTTTCGGCCTCGGCC CGGCGGCTCCGGGCAAGCAGCGTCGGGTCCTGGTGCTGGACCACGAAGACCTCTTCGTTGGGCTGTTGGTCGACGAGGTGCTGGGCCTGCAGCACTTCGC CTTGAGCAGCCTTGAACTGTCGCCGCCCCAGCCGTTGCTGCGTGCTGCGACGCGTTTCGTCCAGGGGCATTTCCCCCGCGAGCGCAACTGGGCGATTTTC
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Amino Acid Sequence |
>response regulator receiver protein
MARVLIVDDSPTEMYRLTEWLEKRGYQVLKANNGADGVALARQEKPDAVLMDIVMPGMNGFQATRQLSKDPETSAIPVIVVTTKDQETDRIWATRQGARD FLTKPVEEDALIAKLKEVLGA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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