Pseudomonas taiwanensis DSM 21245, H620_RS0120195
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas taiwanensis DSM 21245 H620DRAFT_scaffold00001.1, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GTGTTGTGGATGATGGCCAGTCCCCGGCGCTACGTGCAGCCTTCCCATGTAATCCGCATCGCACCGTTGATCTACGGCGGCGGTTTTCGCCGCGACCCTG AACTGGCCATGCACCATGCCGCCAAGGTTCGCTCCGGCGGCAAGATGGGCTACTACTGGCAACTGTTCGCGGGGCTTGGCTGGACCAGCATTCACTGGCT GCACAAGATCAGCCAGCCCACGCTGGTACTGGCAGGCGACGACGACCCACTGATCCCGCTGATCAACATGCGTTTGCTGGCCTGGCGAATTCCCAACGCC GAGCTACACATAATCGACGATGGCCACCTGTTCCTGATTACACGGGCAGAAGCCGTGGCCCCGATCATCATGAAGTTCCTCCACGAAGAACGCCAACGGG CAGTCATGCACCCTCGGCCCGCCTCTGGTGGCTGAGCAGCGCGCTGCGCTCTTGTTTGTACGGCGTGAAGGTGAGAACGGTTCAACGAGGGAGTGTTGAC
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| DNA Sequence for Gene |
>H620_RS0120195
ATGAAAGAGAAACCGGAAAGAGGGACGATCCACGCTCCCGTGAGCAGCATGAACGTGCAGAGCGCCATCGTCGGCCTGCGTGGTCGCGACCTGATTTCCA CCCTGCGCCATGTCGGGCGCCATGGCCTGCGCAACCCGCTGCATACCGCACGCCACCTGCTGGCCTTGGGTGGCCAGCTGGGACGGGTGATGCTCGGCGA TACGCCCAACCAGCCCAACCCCCGCGATAACCGCTTCAGCGATCCGACCTGGAGCCAGAATCCGCTCTACAGTCGTGGCCTGCAAGCCTACCTGGCCTGG CAGAAGCAAACCCGCCTCTGGATCGAAGACAGTTCACTGTCCGATGACGACCGGGCTCGCGCGCAGTTTCTGTTCACCTTGATCAACGATGCCCTGGCGC CAAGCAACTCGCTGCTCAACCCGCTGGCGGTGAAAGAACTGCTCAATACTGGCGGCCAAAGCCTGTTAAGGGGCGTGTCCCACCTGCTCGACGACCTGCG CCACAACGACGGTCTGCCACGCCAGGTCGACGAACGCGCCTTCGAAGTCGGCGGCAACCTGGCTTCGACCCCGGGCGCAGTGGTGTTTCGCAATGAGCTG CTGGAGCTGATCCAGTACAAGCCAATGAGCGAGAAGCAGCATGCACGGCCACTACTGGTGGTGCCGCCGCAGATCAACAAGTTCTACATCTTCGACCTGG GGCCGACCAACAGCTTCGTCCAGTACATGCTCAAGAATGGTCTGCAGGTATTCATGATCAGCTGGCGCAACCCCGACCCACGCCACCGCGAATGGGGGCT GTCCACCTACGTCCAGGCCGTCGAAGAAGCGCTCAATGCCTGCCGCAGTATCAGCGGCAACCGTGACCCCAACCTGATGGGCGCCTGCGCGGGTGGCCTG ACCATGGCGGCGTTGCAGGGCCACCTGCAAGCCAAGCATCAGTTGCGCCGGGTACGCAGCGCGACTTACCTGGTCAGCCTGCTCGACAGCAAGTTCGACA GCCCGGCCAGCCTGTTCGCAGACGAGCAGACCATCGAGGCAGCCAAACGCCGCTCGTACCAACGTGGCGTCCTCGATGGCGCCGAGGTAGCGCGGATCTT CGCCTGGATGCGGCCCAACGACCTGATCTGGAACTACTGGGTCAACAACTATCTGCTCGGCAAGGCCCCACCGGCCTTCGACATCCTCTACTGGAACGCC GACAGCACGCGCCTACCCGCCGCGCTGCATGGCGACCTGCTGGACTTCTTCAAACACAATCCACTGACCCACCCTGCGGGGCTGGAAGTGTGTGGCACGC CCATCGACCTCAAGCAGGTCGATCTCGACAGTTTTACCGTGGCTGGCAGCAACGACCACATCACCCCGTGGGACGCGGTGTACCGATCGGCGTTGCTGCT GGGGGGCGAGCGGCGCTTCGTGCTGGCCAACAGCGGGCACATCCAGAGCATCATCAACCCGCCTGGCAACCCCAAGTCCTACTACCTGGACAACCCAAAG CTCTCCAGCGACCCTCGCGCCTGGTTCCATGACGCCAAGCGCAGCGATGGCAGCTGGTGGCCGCTGTGGCTGGAATGGATCACACCGCGTTCCGGCCCGC TCAAGGCCCCGCGCCTGGAGCTAGGCAACAGCACCTATCCACCGCTGGGCCCCGCGCCAGGCAGCTACGTACTGGCACGCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GCACCTTGACCGGATGAAGACCCGCGACCGTATCCTCGAATGCGCCCTGCAGTTGTTCAACCAGCAGGGCGAACCCAATGTCTCGACCCTTGAGATCGCC AACGAACTGGGCATCAGTCCCGGCAACCTGTACTACCACTTCCATGGCAAGGAGCCACTGGTGATTGGGTTGTTCGAGCGCTTCGAAGAGGAACTGCTGC CGCTGCTCGATCCTCCGCTGGATGTACGTCTGGACGCCGAGGACTATTGGCTGTTCCTGCACCTGATCGTCGAGCGCATGGCCCAGTACCGGTTTCTGTT CCAAGACTTGTCGAATCTGATCGGACGCCTGCCGAAGCTGGCCCGTGGCATCCGCAGCCTGATCAATGCCCTCAAGCGCACGCTCGCTGCCTTGCTGGCC AGCCTCAAGGCCCAGGGGCAGGTCGTCAGCGAAACGCAGGCGCTGGGGCAACTGGTGGAACAGATCACCCTGACCTTGATGTGTTCGCTGGATTACCAGC
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| Amino Acid Sequence |
>poly(3-hydroxyalkanoic acid) synthase 2
MKEKPERGTIHAPVSSMNVQSAIVGLRGRDLISTLRHVGRHGLRNPLHTARHLLALGGQLGRVMLGDTPNQPNPRDNRFSDPTWSQNPLYSRGLQAYLAW QKQTRLWIEDSSLSDDDRARAQFLFTLINDALAPSNSLLNPLAVKELLNTGGQSLLRGVSHLLDDLRHNDGLPRQVDERAFEVGGNLASTPGAVVFRNEL LELIQYKPMSEKQHARPLLVVPPQINKFYIFDLGPTNSFVQYMLKNGLQVFMISWRNPDPRHREWGLSTYVQAVEEALNACRSISGNRDPNLMGACAGGL TMAALQGHLQAKHQLRRVRSATYLVSLLDSKFDSPASLFADEQTIEAAKRRSYQRGVLDGAEVARIFAWMRPNDLIWNYWVNNYLLGKAPPAFDILYWNA DSTRLPAALHGDLLDFFKHNPLTHPAGLEVCGTPIDLKQVDLDSFTVAGSNDHITPWDAVYRSALLLGGERRFVLANSGHIQSIINPPGNPKSYYLDNPK LSSDPRAWFHDAKRSDGSWWPLWLEWITPRSGPLKAPRLELGNSTYPPLGPAPGSYVLAR
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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