Pseudomonas sp. VLB120, PVLB_23190

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. VLB120, complete genome. [Details]
DNA Sequence Upstream of Gene
CAGCCCTCGCTCGGGTAGCGCGGTGTTCCACTACCAGCCGGAAGACAACCCGAACAAGATCGTCAACCTGGGCTATCGCTACCGCAACGACCTGGTCCGC TATGACCAGCTGACCGGTACCTGGCAGGTCGGCGGTGGCGACTACGGCACTCCGGGCAGCCCGAACTACATCAAGGACTACTACAAGATCGAGCAGCATG ACTTCTCCGTCATTTGGCCGATCGTCCCGCAGTGGAGCGTCATCGCTCGCTGGCAGCACGACTACAACCGCAACCGCACCCTGGAAGCCATGGGCGGTTT CGAGTATGACAACTGCTGCTGGAAGCTGCGCCTGATCAACCGTTACTGGATCGACTACGACGACTTCAGCCAGGCCGTTCCGGACAACGAAAAAGGCGAC CATGGCATCTTCCTGCAAATCGTGCTGAAAGGCCTCGGTGGCGTGGTAGGCAACAAGGTCGAGTCGTTCCTCGATGAAGGCATTCAAGGTTACCGTACAC
DNA Sequence for Gene
>PVLB_23190
GTGAAGACCAAGCTTATTGATCGTCTGCGCCCGCTGCTGGTGGGCGCTGCACTGCTGAGCAGCGCGGTTCACGCCGCGGTGCAACCTCTGGACCGTGTGG TGGCCATCGTCGACAACGACGTGGTCATGCAAAGCCAACTGGACCAACGTGTCCACGAAGTCCAACAAACCATCGCCAAGCGCGGCGGCGGCGTGCCGCC GACCGGCGCCCTGGAGCAGCAGGTACTGGAACGCCTGATCGTCGAGAACCTGCAACTGCAGATCGGCGAACGTTCCGGCATCCGCATCACCGATGAAGAA CTGAACCAGGCCATCGGCACCATTGCCCAGCGCAACGGCATGTCCCTGGACCAGTTCCGCGCCGCCCTGGCCCACGACGGCCTGTCGTTCGATGACGCCC GCGAGCAGGTCAAGCGCGAGATGATCATCAGCCGTGTGCGCCAGCGCCGTGTGGCCGAGCGCATCCAGGTGTCCGAGCAGGAAGTGAAGAACTTCCTTGC CTCGGACCTGGGCAAGATGCAGATGTCGGAAGAGTATCGCCTGGCCAACATCCTCATCCCGACCCCGGAAGGCGCCAATTCGCAAGACATCCAGAACGCT GCCCGCAAGGTTGGCGACGTGTACCAGCAACTGCGCCAAGGCGCGGACTTCGGCCAGATGGCGATTGCCAACTCAGCCAGCGAAAACGCCCTGGAAGGCG GCGAGATGGGCTGGCGTAAAGCGGGCCAACTGCCGCCGGAATTCGCCAAGCTGCTGAGCACCATGTCCACTGGCGACATCACCCAGCCACTTCGCATTCC CAGCGGCTTCATCATCATCAAGCTCGAAGAGAAGCGCGGTGGTAGCGAGAACGTGCTGCGTGACGAAGTCCACGTGCGCCATATCCTGATCAAGCCGAGC GAAATCCGCAGCGAAGCGGCGACCGAACAACTGGCGGAGCGCCTCTACGAGCGCATCAAGAATGGCGAAGACTTTGGCGAGCTGGCCAAGAGCTTCTCGG AAGATCCGGGTTCGGCGCTCAACGGCGGCGACCTCAACTGGGTCGACCCGAACAGCCTGGTTCCCGAGTTCCGCGAGCAGATGGCCAACGCCCAGCAAGG CGTAGTGACCAAGCCGTTCAAGACCCAGTATGGCTGGCACGTTCTGGAAGTGCTGGGCCGTCGCGCCACCGACAGCACCGAGCAAGCTCGCGAGATGCAG GCGATGAACGTTCTGCGTAACCGCAAGTACGACGAAGAGCTGCAGACCTGGCTGCGCCAGATCCGCGACGAAGCCTACGTTGAAATCAAGCTGCCTGGCG CCGACCAGGCCACCCAGTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
AGCCGCTGCGCTTCGCCGTCACCCCCGGTGAACCAGCCGGCATAGGCCCGGACCTGTGCCTGCTGCTCGCCGCCGACGCCCAGCCCCATCCCCTGATTGC CATCACCAGCCGTGACCTGCTCGCCGAGCGGGCCACGCAGCTGGGGTTGGCGGTCGATCTGCTGCCGGTTGCGCCGGGCCAGTGGCCCGACCAGCCCGCA CCTGCCGGCAGCCTGTACGTATGGGATACCCCCCTGGCAGCGCCCGTGGTACCAGGCCAGCTCGACAAGGCCAATGCCGCCTTCGTCCTGCAAACCCTGA CGCGCGCTGGCCAAGGCTGCCTCGACGGGTATTTTGCCGGGATGATTACAGCCCCCGTGCACAAGGGTGTGATCAACGAAAGCGGTATCGCCTTTTCCGG CCATACCGAGTTTCTCGCCGAACTGACGCATACCGCCCAAGTGGTGATGATGCTGGCCACACACGGGCTGCGCGTGGCCCTGGTGACCACGCACCTGCCA
Amino Acid Sequence
>SurA domain-containing protein
MKTKLIDRLRPLLVGAALLSSAVHAAVQPLDRVVAIVDNDVVMQSQLDQRVHEVQQTIAKRGGGVPPTGALEQQVLERLIVENLQLQIGERSGIRITDEE LNQAIGTIAQRNGMSLDQFRAALAHDGLSFDDAREQVKREMIISRVRQRRVAERIQVSEQEVKNFLASDLGKMQMSEEYRLANILIPTPEGANSQDIQNA ARKVGDVYQQLRQGADFGQMAIANSASENALEGGEMGWRKAGQLPPEFAKLLSTMSTGDITQPLRIPSGFIIIKLEEKRGGSENVLRDEVHVRHILIKPS EIRSEAATEQLAERLYERIKNGEDFGELAKSFSEDPGSALNGGDLNWVDPNSLVPEFREQMANAQQGVVTKPFKTQYGWHVLEVLGRRATDSTEQAREMQ AMNVLRNRKYDEELQTWLRQIRDEAYVEIKLPGADQATQ
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site