Pseudomonas sp. VLB120, PVLB_22795

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0004096 catalase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PIRSF038928
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0006979 response to oxidative stress
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PIRSF038928
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0020037 heme binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PIRSF038928
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0042744 hydrogen peroxide catabolic process
ISM
Inferred from Sequence Model
Term mapped from: InterPro:cd08156
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Pathways

Database Xref Pathway Version Evidence PMID
KEGG psv01130 Biosynthesis of antibiotics 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG psv01200 Carbon metabolism 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG psv00630 Glyoxylate and dicarboxylate metabolism 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG psv01110 Biosynthesis of secondary metabolites 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG psv00380 Tryptophan metabolism 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
PRINTS PR00067 Catalase signature IPR018028 Catalase, mono-functional, haem-containing 122 140 3.1E-74
FunFam G3DSA:2.40.180.10:FF:000001 Catalase - - 1 479 0.0
Gene3D G3DSA:2.40.180.10 Catalase core domain - - 1 479 0.0
PANTHER PTHR11465 CATALASE IPR018028 Catalase, mono-functional, haem-containing 2 474 0.0
CDD cd08156 catalase_clade_3 IPR040333 Catalase, clade 3 46 474 0.0
MobiDBLite mobidb-lite consensus disorder prediction - - 366 380 -
Pfam PF00199 Catalase IPR011614 Catalase core domain 6 385 0.0
PRINTS PR00067 Catalase signature IPR018028 Catalase, mono-functional, haem-containing 103 120 3.1E-74
SUPERFAMILY SSF56634 Heme-dependent catalase-like IPR020835 Catalase superfamily 3 478 0.0
SMART SM01060 Catalase_2 IPR011614 Catalase core domain 6 389 0.0
PIRSF PIRSF038928 Catalase_clade1-3 IPR024711 Catalase, mono-functional, haem-containing, clades 1 and 3 1 478 0.0
PRINTS PR00067 Catalase signature IPR018028 Catalase, mono-functional, haem-containing 82 100 3.1E-74
MobiDBLite mobidb-lite consensus disorder prediction - - 365 402 -
PRINTS PR00067 Catalase signature IPR018028 Catalase, mono-functional, haem-containing 319 345 3.1E-74
MobiDBLite mobidb-lite consensus disorder prediction - - 1 23 -
Pfam PF06628 Catalase-related immune-responsive IPR010582 Catalase immune-responsive domain 414 474 8.2E-22
PRINTS PR00067 Catalase signature IPR018028 Catalase, mono-functional, haem-containing 287 314 3.1E-74
PRINTS PR00067 Catalase signature IPR018028 Catalase, mono-functional, haem-containing 19 42 3.1E-74
MobiDBLite mobidb-lite consensus disorder prediction - - 1 24 -

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.