Pseudomonas sp. VLB120, PVLB_14810 (metH)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. VLB120, complete genome. [Details]
DNA Sequence Upstream of Gene
GTTGTCGAGCACCGAATAAAAGCCCTTCTTACGCCATTCGGCCTCGCTATGGGCGTCGTAGAACAGCCGTGTGGTGGGCACCGCCTTGCTCCGGTCGCCT TGGTACACCGGCACCTTGGAGGCACCGCGCACTGCACCTTCGGGGCTTTCCAGCTTGAGCTGGCACGCGGCGTCGTTGCACGCATGGCAGGCCACGCATT TCTCGGTGAAGATCGGTTGAATATCCCGGGTGTAGGAGATGCCCGGACTCGACTGGGGGCCCTGCCCAAAGGCCACGCCACTGACGAGCAGCGCGAAGCC ACAAGCCAGGGCAATAAAACAGCGATGCACCATGTGCGCGAAATCCTGGTTACAGAAAGCCATCACGTTAGCCTGGTCGTCCTTGGATGCTCATCGACCC AACATGAACAGAATTCATGCAAATGGGCAGCGCGCCTAAAAACCGCGCAGCTTTGTTATGATTCGGCACCTTCTGATTTTTGCCCGACCAGGTAGTTCCT
DNA Sequence for Gene
>PVLB_14810 |metH
ATGTCCGACCGCAGCGCTCGTCTCCAAGCACTCCAGAACGCACTCAAAGAGCGCATCCTGATCCTCGACGGTGGCATGGGTACTATGATCCAAAGTTACC GCCTCGAGGAACACGACTATCGTGGCACGCGCTTTGCCGATTGGCCAAGTGACGTCAAGGGAAACAACGATCTGCTGCTGCTCAGCCGCCCCGATGTGAT CGCCGCCATCGAGAAGGCCTACCTGGACGCTGGCGCCGACATCCTTGAAACCAACACGTTCAACGCCACGCAAATCTCCCAGGCCGACTACGGCATGGAG TCGCTGGTGTACGAGCTGAACGTCGAAGGCGCCCGCATCGCCCGCCAGGTGGCCGACGCCAAGACCCTGGAAACCCCGGACAAACCGCGTTTCGTCGCCG GCGTGCTCGGCCCTACCAGCCGTACCTGCTCGATCTCCCCGGACGTCAACGACCCCGGCTACCGCAACGTCACCTTCGACGAGTTGGTGGAAAACTACAT CGAGGCCACCCGTGGCTTGATCGAAGGCGGCGCCGACCTGCTGCTGATCGAAACCATCTTCGACACCCTCAACGCCAAGGCCGCGATCTTTGCCGTGCAG CAAGTGTTCGAAGAAGACGGCGTCGAACTGCCGATCATGATCTCCGGCACCATCACCGATGCCTCCGGCCGAACCTTGTCCGGCCAGACCACCGAAGCCT TCTGGAACTCGGTGCGACACGCCAAGCCGATTTCCGTCGGCCTGAACTGCGCCCTGGGCGCCAAGGACTTGCGTCCGTACCTGGAAGAACTGGCGACCAA GGCCGACACCCATGTTTCGGCGCACCCCAATGCCGGCCTGCCCAACGCGTTCGGCGAATACGACGAAACCCCGGCGGAAATGGCTGCCGTGGTCGAGGAG TTCGCTGCCAGCGGTTTCCTCAACATCATTGGCGGTTGCTGCGGCACCACCCCGCCGCATATCCAGGCCATCGCCGAAGCTGTGGCCAAGTACAAGCCGC GGGCCATTCCCGATATTCCCAAGGCTTGCCGCCTGTCGGGCCTGGAACCGTTCACCATCGATCGTCAGTCGCTGTTCGTCAACGTCGGCGAGCGGACCAA CATCACCGGTTCCGCCAAATTCGCCCGGCTGATCCGCGAAGAGAACTACACCGAAGCGCTGGAAGTCGCCCTGCAGCAGGTAGAAGCCGGCGCCCAGGTG ATCGACATCAACATGGACGAAGGGATGCTCGACTCCCAGGCTGCCATGGTCCGCTTCCTCAACCTGATCGCTGGCGAGCCGGATATCTCCCGCGTGCCGA TCATGATCGACTCCTCCAAATGGGAAGTGATCGAAGCGGGCCTCAAGTGCATCCAGGGCAAGGGCATCGTCAACTCGATCTCCATGAAGGAAGGCGTCGA GCAGTTCAAGCACCACGCACGCCTGTGCAAGCGCTATGGCGCCGCCGTGGTGGTGATGGCCTTCGACGAAGTCGGCCAGGCCGACACTGCCGCACGCAAG AAGGAGATCTGCCAGCGCAGCTACGACATCCTGGTCAACGAGGTAGGCTTCCCACCGGAAGACATCATCTTCGACCCCAACATCTTCGCCGTGGCCACTG GCATCGAAGAGCACAACAACTACGCCGTCGACTTCATCGAGGCCTGTGCCTACATCCGTGACCACCTGCCTTTCGCGCTGTCGAGCGGTGGTGTGTCCAA CGTATCGTTCTCGTTCCGCGGCAACAACCCGGTGCGCGAGGCGATCCACTCGGTGTTCCTCTACCACGCCATCCAGAACGGCCTGACCATGGGTATCGTC AACGCTGGCCAGTTGGAGATCTACGACGAGATCCCGCCTGCCCTGCGCGAGAAGGTCGAGGACGTGGTACTCAACCGCACCCCGCACGGCACCGATGCAT TGCTGGCCATTGCCGATGACTACAAGGGCGGTGGCGCGGCCAAGGAAGTGGAAAACGAAGAGTGGCGCTCGCTGCCGGTGGAAAAACGCCTGGAGCACGC GCTGGTCAAAGGCATCACAGCCTTCATCGTCGAAGACACCGAAGAGTGCCGTCAACAGTGCGCGCGTCCTATCGAGGTCATCGAAGGCCCGCTGATGAGC GGCATGAACGTGGTCGGCGACCTGTTCGGTGCTGGCAAGATGTTCCTGCCCCAGGTGGTGAAGTCAGCCCGCGTGATGAAACAGGCGGTAGCCCACCTGA TCCCCTTCATCGAGGCGGAAAAAGGCGACAAGCCAGAGGCCAAGGGCAAGATCCTGATGGCCACGGTCAAAGGCGACGTGCACGACATCGGCAAGAATAT CGTCGGCGTGGTGCTGGGCTGCAACGGCTACGACATCGTCGACCTGGGCGTGATGGTGCCGGCGGAGAAGATCCTGCAGACCGCCCGTGAACAGAACTGC GACATCATCGGTCTATCCGGCCTGATCACCCCGTCGCTGGACGAGATGGTCCACGTCGCCCGTGAAATGCAGCGCCAGGATTTCCACCTGCCGCTGATGA TCGGTGGCGCCACCACCTCCAAGGCCCACACAGCGGTGAAGATCGAACCCAAGTACAGCAACGATGCGGTGGTCTATGTCACCGACGCCTCCCGCGCCGT GGGTGTCGCCACCCAGCTGCTGTCCAAGGAGCTCAAGCCAGGCTTCGTCGAGAAAACTCGCCAGGACTATGAAGAAGTGCGCGAGCGCACCGCCAACCGC AGCGCCCGCACCGAGCGCCTGAGCTACGCCCAGGCAGTGGCCGCCAAACCGAAGTACGACTGGGCCGGCTACCAACCGGTCGTCCCGTCCTTCACCGGCG TCAAGGTGCTGGAAGACATCGACCTGCGCACCTTGGCCGAGTACATCGACTGGACCCCGTTCTTCATCTCCTGGGACCTGGCCGGCAAGTTCCCGCGCAT CCTCACCGACGAGGTGGTCGGGGAAGCCGCCACCGCGCTGTACAAGGATGCCCGCGAGATGCTCGACAAGCTGATCGACGAAAAGCTGATCAGCGCCCGT GCCGTCTTCGGTTTCTGGCCAGCCAACCAGGTGGCCGACGACGACATCGAAGTGTACGGCGAGAACGGCCAGACGCTGGCCACCCTGCACCACCTGCGCC AGCAGACCATCAAGCCGGACGGTAAGCCGAACTTCTCCCTGGCCGACTTCGTCGCACCAAAGGACAGCGGCGTCACTGACTACATGGGCGGCTTCATCAC CACCGCTGGCATCGGTGCCGAGGAAGTGGCCAAGGCCTACCAGGACAAGGGCGACGACTACAGCTCGATCATGGTCAAAGCCCTGGCCGACCGCCTGGCC GAGGCCTGCGCCGAATGGCTGCACGAGCAGGTGCGTAAAGAGCACTGGGGTTATGCCAAGGACGAGCACCTGGACAACGAAGCGCTGATCAAGGAGCAGT ACAGCGGCATCCGCCCTGCCCCAGGCTACCCCGCGTGCCCGGATCACACCGAGAAGGCCACGCTGTTCCGCCTGCTCGACGGCAGCGCCATCGGCGAAAC CGGCCCAAGTGGCGTATTCCTCACCGAGCACTTCGCGATGTTCCCGGCGGCAGCGGTCAGCGGCTGGTATTTCGCCCACCCGCAGGCGCAGTACTTTGCC GTGGGCAAGGTCGACAAGGACCAGATCGACAGCTACAGCGCGCGCAAGGGCCAGGAGGTAACCGTAAGTGAGCGTTGGCTGGCACCTAACCTCGGTTACG ACAGCTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
CAGTTCATCGCCGGCACGCCGGCGCCTGCAACGATGGCGCAGAGCCTGCAGGAGCCGACTTGCCAGCGATGAGGCCAGTACCTATCACCTACACTGTCCT TGTATGCCTCTGCATTGATCAGGAGCCCCCATGGACGATTCCAGCCAAGGCAAGCCGCCCACCTTCTGGCAGATGCTGCACAGCATCCTGGCCGCAGCGT TCGGCGTGCAGAGCGGCAAGAACCGGGCACGCGACTTCACTCACGGCAAAGCCAGCCACTTCATCGTGCTGGGCACGTTGTTCACGCTGGTGTTCATCCT GGTGCTGATCGGCCTCGTGCAACTGGCCGTGCACCTCACCGCCCGCTAAAACGCAATCCGCCCGCGGAAATCCCTTCCACGGGCGGCTCAGGTTGAGTCA CGGTCTGAAGACTAAGGCTACTGGTGGCTGACCCAATATACGGCAGTGACCACCACCAGGACGATCAGGCAGAGGATCGCCCAGGCATCGACGCTGCTGT
Amino Acid Sequence
>B12-dependent methionine synthase
MSDRSARLQALQNALKERILILDGGMGTMIQSYRLEEHDYRGTRFADWPSDVKGNNDLLLLSRPDVIAAIEKAYLDAGADILETNTFNATQISQADYGME SLVYELNVEGARIARQVADAKTLETPDKPRFVAGVLGPTSRTCSISPDVNDPGYRNVTFDELVENYIEATRGLIEGGADLLLIETIFDTLNAKAAIFAVQ QVFEEDGVELPIMISGTITDASGRTLSGQTTEAFWNSVRHAKPISVGLNCALGAKDLRPYLEELATKADTHVSAHPNAGLPNAFGEYDETPAEMAAVVEE FAASGFLNIIGGCCGTTPPHIQAIAEAVAKYKPRAIPDIPKACRLSGLEPFTIDRQSLFVNVGERTNITGSAKFARLIREENYTEALEVALQQVEAGAQV IDINMDEGMLDSQAAMVRFLNLIAGEPDISRVPIMIDSSKWEVIEAGLKCIQGKGIVNSISMKEGVEQFKHHARLCKRYGAAVVVMAFDEVGQADTAARK KEICQRSYDILVNEVGFPPEDIIFDPNIFAVATGIEEHNNYAVDFIEACAYIRDHLPFALSSGGVSNVSFSFRGNNPVREAIHSVFLYHAIQNGLTMGIV NAGQLEIYDEIPPALREKVEDVVLNRTPHGTDALLAIADDYKGGGAAKEVENEEWRSLPVEKRLEHALVKGITAFIVEDTEECRQQCARPIEVIEGPLMS GMNVVGDLFGAGKMFLPQVVKSARVMKQAVAHLIPFIEAEKGDKPEAKGKILMATVKGDVHDIGKNIVGVVLGCNGYDIVDLGVMVPAEKILQTAREQNC DIIGLSGLITPSLDEMVHVAREMQRQDFHLPLMIGGATTSKAHTAVKIEPKYSNDAVVYVTDASRAVGVATQLLSKELKPGFVEKTRQDYEEVRERTANR SARTERLSYAQAVAAKPKYDWAGYQPVVPSFTGVKVLEDIDLRTLAEYIDWTPFFISWDLAGKFPRILTDEVVGEAATALYKDAREMLDKLIDEKLISAR AVFGFWPANQVADDDIEVYGENGQTLATLHHLRQQTIKPDGKPNFSLADFVAPKDSGVTDYMGGFITTAGIGAEEVAKAYQDKGDDYSSIMVKALADRLA EACAEWLHEQVRKEHWGYAKDEHLDNEALIKEQYSGIRPAPGYPACPDHTEKATLFRLLDGSAIGETGPSGVFLTEHFAMFPAAAVSGWYFAHPQAQYFA VGKVDKDQIDSYSARKGQEVTVSERWLAPNLGYDS
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site