Pseudomonas sp. VLB120, PVLB_14690
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas sp. VLB120, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
GTGCTGATGCTGACCGCCCGCAACGACGAGACCGACCGCATCATCGGCCTGGAGATGGGCGCAGACGACTACCTGACCAAGCCCTTCTCCGCCCGCGAAC TGCTCGCTCGCATCAACGCGGTGCTGCGTCGGACCCGCATGCTGCCGCCCAACCTGACCATCAGCGAAAGCAGCCGCCTGCTCGGCTTCGGCCAGTGGCG CCTTGACACCACCGCACGTCACTTGCTCGACAGCGAAGGCACCCTGGTGGCGCTCAGCGGCGCCGAGTACCGCTTGCTGCGGGTGTTCCTCGACCATCCG CAACGGGTGCTGAGCCGCGAGCAGTTGCTCAACCTTACCCAGGGCCGCGAGGCGGACATCTTCGACCGCTCCATCGACCTGCTGGTCAGTCGCTTGCGCC AGCGCCTGGGCGACGACGCTCGGGAGCCCAGCTGCATCAAGACCGTACGCAGCGAAGGCTACGTCTTTTCACTGCCCGTGCAGCTGCTCGAGTCACCCTC
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| DNA Sequence for Gene |
>PVLB_14690
ATGAAATGGCCCCGCACCCTGGCCTCGCGCCTGGCCCTGATCTTCTTCACCGGATTGGTACTGGCCTATGGGCTGTCGTTCAGCCTGCAGGCCTATGAGC GGTTCGTCAGCAGCCGCTCGATGATGCTCAGCAATCTGGAACAAGACGTCGCCACCTCGGTAGCCATCCTCGACCGCCTGCCTGCGGCCGAGCGCGCCAG CTGGCTGCCTCGCCTGGAGCGGCGCACCTACCGCTACCGGCTCGACCCGGGGGAGTCGGGCGAAGCGATGCCAACCGAGAACCCGCCGATGGCCGCCGAT TCGATCGTAAAAGCCATCGGCCATGACTACCGCCTGACCTTCCAGGATATCCCTGGCCCGAATGCGCACTTCCAGGTCCATTTACGCCTGGCGGATGGCG CGCCCTTGACCATCGATGTCACGCCGGCACCGGTGCCCATGGCTACCTGGCTGCCAACGGTGCTGCTGATCCAGTTGCTTGTCCTGTTGCTGTGCACCTG GATGGCCGTGCGCCTGGCCATCGGCCCACTGACCCGCCTGGCCCAGGCCGTAGACAACCTCGACCCGGACAAACCTGGCGTGCAACTGGACGAAAGCGGC CCGCGAGAAGTTCGCTACGCCGCGGCTGCGTTCAACGCGCTGCAGGCGCGAATCGCCGCTTACTTGAAGGAGCGCATGCAACTGCTGGCCGCGATCTCCC ATGACCTGCAAACCCCCATTACCCGCATGAAGCTGCGGGTCGAGGTCATGGACGATGGCGCCGATAAGGACAAGCTGTGGAGCGACCTCAACGCCATGGA GCATCTGGTGCGTGAGGGCGTCGCCTACGCCCGCAGCATGGACAGCAGCACCGAAGCGCCTTGCCGGATCAACCTCGACGCCTTCCTCGACAGCGTGGTG TTCGACTATCAGGACAGCGGCGCCCAGGTCGCCCGGCATGGCACCACCGATAGCCTGCTGGAGACCCGTCCCCATGCCCTGCGCCGGGTGCTGGTGAACC TGATCGACAACGCCCTCAAGTTCGCTGGCGCCGCAGAGCTGGAAGTGTCCCGCGAGGGCGGCAGTACGCTGATCCGCGTGCTCGATGACGGCCCCGGCAT TCCTGCTGATGAGCTGGATGACGTGCTCAAGCCCTTCTACCGGGTGGAAGGCTCGCGCAACCGCAGCACGGGCGGCACCGGGCTGGGCCTGGCGATCGCC CAGCAGCTGACCCAGGCCATGGGTGGCCAGCTGACCCTGAGCAATCGCGCCTCTGGCGGGCTGTGTGCCCAAATCGAACTGAAGTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GTCTGGCCAGCGCCCGCGCTGGCCCATGACTTTGCCCACGATCCAGATCGCTACAGTCCGATACACAAACGCCCCTTCACCGACACACTGCAGATACCCC CCGCCTTCACACTCTCGGCATACCACCACAACCGGGAGCGCCCTCGATGAAATCCCTCACCCTGCCCAGCGGCTGGAAGCTATTCGCCGCCCTTGCCGGC CTGACTTTGGCCATGACCGCCGTAGTACTTGCCAGCCACCCCATTGGCTCGGATGGGCTGCGCAGCGCGATACGCGCCACTGCGCGCAGTTCGTTCGCGT TGTTCCTGCTGGCCTTCCTGGCGTCGACGCTGGTGACCTTCCTCCCCGGTAGTGGCAGCCGCTGGCTGATACGCGAACGACGGTTCCTGGGCCTGGCGTT CGCTTTCTCGCACACCGTGCATGGCCTGTTGATCTACCGCTATGCCCAGCAGTTCCCCGAGTTGTTCTGGGCCGGTCGCACGGTAACCTCCAGCCTTCCT
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| Amino Acid Sequence |
>integral membrane sensor signal transduction histidine kinase
MKWPRTLASRLALIFFTGLVLAYGLSFSLQAYERFVSSRSMMLSNLEQDVATSVAILDRLPAAERASWLPRLERRTYRYRLDPGESGEAMPTENPPMAAD SIVKAIGHDYRLTFQDIPGPNAHFQVHLRLADGAPLTIDVTPAPVPMATWLPTVLLIQLLVLLLCTWMAVRLAIGPLTRLAQAVDNLDPDKPGVQLDESG PREVRYAAAAFNALQARIAAYLKERMQLLAAISHDLQTPITRMKLRVEVMDDGADKDKLWSDLNAMEHLVREGVAYARSMDSSTEAPCRINLDAFLDSVV FDYQDSGAQVARHGTTDSLLETRPHALRRVLVNLIDNALKFAGAAELEVSREGGSTLIRVLDDGPGIPADELDDVLKPFYRVEGSRNRSTGGTGLGLAIA QQLTQAMGGQLTLSNRASGGLCAQIELK
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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