Pseudomonas sp. VLB120, PVLB_12695
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas sp. VLB120, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
AGCGAGACCCTGCATGTGGCAGTACGCCAGGGACACCCCGACGTCGATGGCGCACTCGACCTGCAGACTTTCCTGGGCTTGCGTCATCTTTGGGTGCACG GCGGCCAGACCCGTGGCATGGTCGATCAGTGGCTGGGCGAGCAGGGTCTAGCCCGGCGTATCGTCTACACCACACCCAACTATCTGCAAGCCGCACACCT TGCCGCCAGTTCTGACTTGTGTGTGGTATTGCCCACCGCGCTGGCGCGCCATTTCGCCCAGTTGCTGCCGCTGCAGGTATTCGACCTGCCCTTCGCCCTG GAACCGTTCCAGCTGGAGCTGGTGTACCTTGCCCACCGCCAGCACGATCCGGCGTTGGCCTGGCTGGTGGCCCGTATCATGGACATACGCGCCGGCTGAG CCATCGCATCCGGGCATGGCAGGGCATACAGCAGAGGTATTGGTTAGGCGCCAAGCTCTGTCCTTAGAGTGGTCGCCCTCAAAACAACAAGGAATGCCCC
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| DNA Sequence for Gene |
>PVLB_12695
ATGCGCCTACGATCTCTGCCCTACCTGCTGGCCATCGCTCTGCCCTTTACCGCGCACGCCGATTCGCCCGGCAAGGACGCTACCGACCTCACCCGCCAGA GTAATCAGCAATGGCTTCAACGCCTGCCGTTCGCCGACCGTAACGACTTCGCCGATGCTCGCCGCGGCTTGCTCGAAGCCGTGGACCAAGCCGTAGTCAC TGCCGATGGCAAAACCGTCTGGGACCTGCAGCGCTATGCATTTCTCAACGGCGAGGCACCGGCCACGGTCAACCCGAGCCTGTGGCGTATCGCCCAGCTC AATACCATCGCAGGCTTGTTCAAGGTCACCGAGGGCATCTACCAGGTACGTGGCCTTGACCTGGCCAACATGACCCTGATCGAAGGCGAGCACGGCCTGA TCGTCATGGACCCGCTGCTGTCGGTCGAGACTGCCAAGGCCGGGCTGGCGATGTACTTCCGGCATCGCCCGCAGCGTCCGGTGGTGGCGGTGATCTACAC CCATCCCCACGTCGATCACTTCGGCGGAGTGCGCGGCGTGATCGACGAGGCCGACGTCAAGGCCGGGAAGGTTCAGGTCATCGCCCCGCAGGGCTTCTTC GAGCATGCCATCAGCGAAAACGTGTTGGCGGGGCCTGCAATGAAGCGACGAGCGCAGTACATGTATGGCGCACCGCTGCCACGCGGGCCGCGCGGCCAAG TGGACGCTGGCCTTGGCAAGGGTGTACCGGCCAATGCCACGGTCAGCCTGATCGCCCCTACGCGGCTGATCGAAAAACCCATCGAGACGCTGCGCATCGA TGGTGTCGATATTGAGTTCCAGCTCACGCCCGGCACCGAGGCACCTGCCGAAATGAACCTGTGGTTCCCCACGTTCAAAGCCCTGTGCATGGCCGAGAAC GCCTCCCACGTGCAGCACAACGTGCTGACCTTGCGCGGCGCCCAGGTGCGCGATGCCAAGGTCTGGGCGTACTACCTGGATCAATCGCTGTTGCGCTACG GCAACCAGGCCGAAGTGGTCTTCGCCCAGCACCACTGGCCGACCTGGGGTGGTGAGGCGATCCGCGAGTACCTGGCCGACCAGCGCGACATGTATGCCTT CATCGACAGCCAGACCCTGCGCCTGATCAACCGGGGCCTTGGCCCCACCGAGATCGCCGCCGAACTGACCTCGCTGCCGCCTCGGCTGGCCAGCAAATGG TACAGCCGCGACTATTACGGCTCGCTCAGCCATAACGTGCGTGCGGTTTACCAGCGCTACATGGGCTTCTACGATGGCAACCCGGCGACGCTGAACCCGC TGCCGCCACGCGAGACTGGCGAACATTACGTCAAGGCCCTCGGCGGTGCCGAGCGAGTGCTGACCTTGGCCAAGCAAGCGTATGACAACGGCGACTACCG CTGGGTAGCAGAGCTTACCCGCCACCTGATTTTTGCCCAGCCGGACCATCGCGCCGCGCGCGAGCTGCAAGCCGACGCACTGGAGCAACTGGGCTATCAA AGCGAAAACGCCACCTGGCGCAACGCCTACCTGACCGGCGCGCAGGAACTGCGTAACGGTGTGGCAACCACCGCCAGCAGGGGCGGTAGCGCCGATGACC TGGTGCGAGCGCTGACCCCATCGCTGTTCTTCGACTACCTGGGCGTGCGTGTCGATGCAGCCAAAGCTGCCGCGCAGGACCTGACCATCAACTGGCGCTT CACCGACATGAACGAGTCCTATGCCCTGACCCTGCGCAATGGCGTGCTTACCCACCGCGACCATACGCAACACGCCAAGGCGGATGTGCAAGTGTCGATG AGCAAGGCCACCTTGGACCTCATCGCACTCAAGCAGACCGGTTTCCTCAAGGAAACCAAGTCAGGTGGCATCGTCATCAGCGGCGAGCGGGAGAAATTCA TGCGCTTCATGGCGCAGTTGGACGAACCAGATGGGCGCTTCAACATCGTCACGCCCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
TTGACTCGACAGCGCCGCTCTAGATTGAGCGGCGCAACCACACACACAGCACCAGCAGCGCCACCCCTATGGCACAGAGCGGCACGATGCAGGCGCCTGC GCGTCCTTGCTCGCTGCACAACATGCCCAGTCCTCGGCGGTAGATCCCCCGCTCCCGCACCCGCCCCAGCAACGCCAGCAGCACGCCCATGCCCGCAATG GCGAGCATTTCGCCGCGCCAGGCCAGGCATGCCACTAGCAGCAATGAGACTTGGGTACGCCGCCAGGCCAGCACCGTGCGTTCTGCCTGCAGTCCCTGGT CGACACTGCAATCAACCATGCCAACGCCCCCACAACGCCTCTACCAGCGCAATGCTGGCCAGCGCGCATGCGATGCTCAGCAGCGGTACCAGCCGAGGTA ACGGCAATGGCGCTTCGCAACGCAGTGCGCGTTCCACCGTTAACCAGCGCCAGCCAGCGCCCAGGCTTACCAGCAAGCTGGCTGCCAGCAGTGCCATTTC
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| Amino Acid Sequence |
>beta-lactamase domain-containing protein
MRLRSLPYLLAIALPFTAHADSPGKDATDLTRQSNQQWLQRLPFADRNDFADARRGLLEAVDQAVVTADGKTVWDLQRYAFLNGEAPATVNPSLWRIAQL NTIAGLFKVTEGIYQVRGLDLANMTLIEGEHGLIVMDPLLSVETAKAGLAMYFRHRPQRPVVAVIYTHPHVDHFGGVRGVIDEADVKAGKVQVIAPQGFF EHAISENVLAGPAMKRRAQYMYGAPLPRGPRGQVDAGLGKGVPANATVSLIAPTRLIEKPIETLRIDGVDIEFQLTPGTEAPAEMNLWFPTFKALCMAEN ASHVQHNVLTLRGAQVRDAKVWAYYLDQSLLRYGNQAEVVFAQHHWPTWGGEAIREYLADQRDMYAFIDSQTLRLINRGLGPTEIAAELTSLPPRLASKW YSRDYYGSLSHNVRAVYQRYMGFYDGNPATLNPLPPRETGEHYVKALGGAERVLTLAKQAYDNGDYRWVAELTRHLIFAQPDHRAARELQADALEQLGYQ SENATWRNAYLTGAQELRNGVATTASRGGSADDLVRALTPSLFFDYLGVRVDAAKAAAQDLTINWRFTDMNESYALTLRNGVLTHRDHTQHAKADVQVSM SKATLDLIALKQTGFLKETKSGGIVISGEREKFMRFMAQLDEPDGRFNIVTP
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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