Pseudomonas sp. VLB120, PVLB_11830
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|
Functional Classifications Manually Assigned by PseudoCAP
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Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| Pfam | PF01042 | Endoribonuclease L-PSP | IPR006175 | YjgF/YER057c/UK114 family | 24 | 117 | 1.9E-22 |
| Gene3D | G3DSA:3.30.1330.40 | - | IPR035959 | RutC-like superfamily | 9 | 119 | 1.3E-29 |
| SUPERFAMILY | SSF55298 | YjgF-like | IPR035959 | RutC-like superfamily | 17 | 118 | 3.77E-27 |
| CDD | cd00448 | YjgF_YER057c_UK114_family | - | - | 30 | 116 | 4.89252E-25 |
| PANTHER | PTHR11803 | 2-IMINOBUTANOATE/2-IMINOPROPANOATE DEAMINASE RIDA | IPR006175 | YjgF/YER057c/UK114 family | 34 | 117 | 1.3E-17 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.