Pseudomonas sp. VLB120, PVLB_11790

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. VLB120, complete genome. [Details]
DNA Sequence Upstream of Gene
GCGTTCCTGGTGCTGGCCGCCCAGTATGAAAGCTGGAGCCTGCCGCTGGCGGTGATCCTGATCGTGCCGATGACCCTGCTGTCGGCCATTACCGGGGTGA TCGTATCGGGTGGCGACAACAACATCTTCACCCAGATCGGCTTGATCGTACTGGTCGGACTGGCATGCAAGAACGCGATTCTGATCGTCGAGTTCGCCAA GGATGAACAGGCCAAGGGCCTGGACCCATTGGCGGCTGTACTGGAAGCCTGCCGTCTGCGCCTGCGCCCGATCCTGATGACCTCGATCGCCTTCATCATG GGTGTGGTACCCCTGGTGTTCTCCTCCGGCGCCGGATCGGAAATGCGCCATGCCATGGGTGTCGCGGTGTTCTCGGGAATGATCGGGGTGACCGTGTTCG GGCTGTTCCTGACGCCAGTGTTCTTCTTCCTGATCCGCCGTTTCGTCGAGCGTCGCCAGGCCCGCAAGGCTTCGCACGTGCCATCGCTGGAGAGCCACGC
DNA Sequence for Gene
>PVLB_11790
ATGAACCTGCTCAAACCCCTGACGCCTAGCCTGCTGGCACTGGCCCTGGCGGCCTGCGCGGTGGGCCCGGACTACAAGACACCGGACACCGAACCTGCGC ATCTGGACACCCAGGCCCAAGCCCAGGCGTTCGATCGCAGCCACTTCGAAAGCGTGTGGTGGAAGCAGTTCGACGACCCGGTGCTCAACCAGCTGGTGCA GGCCTCGTTGGAAGGCAACCGCGACTTGCGCGTGGCCTTCGCCCGCCTCAAGTCGGCGCGGGCGATCCGTGAGGATGCCTCGAACGATCAACTGCCGGTG GTGACCAGTCGCGCCAGCAGCGAAATCGGCAAGGGCCAGATTCCCGGCCAGACCGAACAGCGAGTCAACAGCGAGCGCTATGATTTGGGCCTGGACATGG CTTGGGAGCTCGACCTTTTCGGCCGCATCCAACGCCAGATCGAGGCCAGCGAAGCCCAGGAGGCAGTCGCCCAGGCCGACCTGCAACAGCTGCAGGTCAG CCTGATCGCTGAACTGGTCGACGCCTACGGTCAACTGCGCGGTGCTCAGTTGCGCGAGAAAATTGCCCTGGCCAACCTCAAGACCCAGGAGGAGTCGCGT GCCATCACCGAAACCCTGCGTGACGCCGGGGTCGGCAACGAACTGGACGTAGTGCGCGCCGACGCGCGGCTGGCCGGGGTCGAGGCGACCGTACCGCAAC TGCAGGCCGAACAGGTCCGGGCGCGCAACCGCATCGCCACCCTGCTTGGCCAGCGTCCGGATGCACTGAGTGTCGACCTCTCGCCCAAGGCGCTGCCGGC CATCGCCAAGGCCCTGCCGGTGGGTGACCCGGGCGAGCTGCTGCGCCGCCGCCCGGACATCCGCAGCGCCGAACGCCAACTGGCCGCTGCCACGGCAAAC GTTGGGGTGGCTACCGCCGACCTGTTCCCACGGGTAAGCCTCAGCGGCTTCCTGGGTTTCACCGCCGCGCGCGGTTCGCAGATCGGCTCGTCCGCGGCCA ATGCCTGGGCGCTTGGCCCCAGCATCACCTGGGCCGCCTTCGATCTGGGCAGCGTGCGGGCACGCTTGCGTGGAGCCAAAGCCGATGCCGAAGGCGCCCT GGCCAACTACGAGCAGCAGGTATTGCTGGCCCTGGAAGAATCGGCCAACGCCTTCAGCGACTACGGCAAGCGGCAACAACGCTTGCTGTCGCTCATGCGC CAAAGCGACGCCAGCCGCAAGGCCGCCGAACTCGCTTCGGTGCGCTACCGCGAGGGCACGGTGGACTACCTGGTGCTACTGGACGCCGAACGCGAACGCC TGAGCGCCGAAGACGCCCAAGCCCAGGGTGAAGTCGAGCTGTATCGCGGCATCGTCTCGATCTACAAAGCCCTCGGTGGCGGCTGGCAACCCGAGACAGT GGCCAGCGCCCACTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
TTCAACGACTCCTTTGGTTGGATCCTCCGCCAACCGTTTGCCCCGCTGGCCTCGCGCCTGCGGGGCTTTTTTGTTCATCCTTCGCCTACGCGGCACCGAG CCGACCGCAGACAAGGGTTGAGCCAATGCACCTTGCAGACAGGGGCATTCTGCCCCAAGCTCTGCCTTCCCACCGCCATGGATCGCCCGATGCTCAAACG CCACCACTACCTGATCGCCTTGCTGGCGCTGGTCCTGGCGACGACTGCGTTGGTCTTCCTGCGCCGCGATGACCAACCCACGCCGCCGACCTTGCCTGCG CACAGTTATGCCAAGGCATTGCGCCAGGCCCATGAAGGCCTGCCAGGCGCCGCGCGGGTGCTGTACCAGCAATTGCAACGCAACGACCTCGCGCCGATTC GCCGCGCCGCACTCTACGCCGAGTTGCCCAACTACCCGTCGCCACAAGCACTGAAGCTTGCGCAGCAAGATTTGGAGCATGACGAGCCGCTGGTACGCCG
Amino Acid Sequence
>RND efflux system outer membrane lipoprotein
MNLLKPLTPSLLALALAACAVGPDYKTPDTEPAHLDTQAQAQAFDRSHFESVWWKQFDDPVLNQLVQASLEGNRDLRVAFARLKSARAIREDASNDQLPV VTSRASSEIGKGQIPGQTEQRVNSERYDLGLDMAWELDLFGRIQRQIEASEAQEAVAQADLQQLQVSLIAELVDAYGQLRGAQLREKIALANLKTQEESR AITETLRDAGVGNELDVVRADARLAGVEATVPQLQAEQVRARNRIATLLGQRPDALSVDLSPKALPAIAKALPVGDPGELLRRRPDIRSAERQLAAATAN VGVATADLFPRVSLSGFLGFTAARGSQIGSSAANAWALGPSITWAAFDLGSVRARLRGAKADAEGALANYEQQVLLALEESANAFSDYGKRQQRLLSLMR QSDASRKAAELASVRYREGTVDYLVLLDAERERLSAEDAQAQGEVELYRGIVSIYKALGGGWQPETVASAH
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site