Pseudomonas sp. VLB120, PVLB_10205

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. VLB120, complete genome. [Details]
DNA Sequence Upstream of Gene
CGCTGATCAATTTCAGCGAGACCCTGCGTCCGAAAGACGTACTGGAAACCCTGATGAACACCACTGGCATGATCGCCTTGCTGGTGTACCTGGTAATTGC CTTCTCGCAGCTGCGCATGCGCCGCAAGCTGATCGCCGAGGGCAAGGAAGTGCGCCTGAAGATGTGGCTGTTCCCTTGGCTGACCTACCTGGTGATCGCT TTCATCGTGGCAGCCCTGGTGACCATGGCATTCATGCCTGACTACCAGATCCTGGTGATCTCCACCGGCATCGCCGCTGCCATCGTGGTGGCCATGGGTG TGGTGCACCAGATCCGTACTGGCAAGCAACACTAAGCGTTCAACGCTTGAGAGACGGCCGGCTTCTTCGGGAGGCCGGCCGTTTTTTTTCGTGATGGTGG AGGCGCCACGCGGCGTTACCGAAAGTGTGAGCAAGCGCATGACCCTAAGTATGGGCACATGGCTTATGCTTCGAGCATTGCCCGCCAAAAGGAACCCGCC
DNA Sequence for Gene
>PVLB_10205
ATGGCCTGGTCCGCCAATCAGTATTCGCTTTTCGAAGATGAACGCACCCGCGCCGTGCGCGACCTGCTCGCCGCGGTGCCGCAGCGCGCGGTGCACCACG CCACCGACCTGGGCTGCGGCCCTGGAAACTCTACCGAAGTCCTGCTGCACCATTGTCCCGATGCCCAGGTTGTGGCCCTGGACAACGACCAGGACATGAT CAACAAGGCGCTTGAGCGGCAACGGTTGCGCGTGCTGCGGGTGCGTTGCGAGAAGGCCGATATCGCCACTTGGACCGCATCGAAACCGCAGGACCTGATC CTGGCCAATGCGTCGTTGCAGTGGTTGCCGGACCACGGATCGCTGTACCCTCATTTGGTTCACCAGCTGTGCGAGGGCGGCAGTCTCGCGGTGCAGACGC CCGACAACCTGGACGAACCTGCGCACCGGCGGTTGCGTGAAATCGCCAGCCAGGGCCCTTGGGCCGACAAGTTCGCTGACCATGTCCTGCCGCCCCGGCA CAGCGCAGCCTATTACTATGACCTGCTCAGCCCCCTGTGCGCCCGCGTGGATGTATGGCGCACCACCTACCATCACCCCTTGGCGGGAGGCGCCGAGGCA GTCGTGGAGTGGTTCAAGGGCTCGGCGCTGCGACCTTACCTGGCAAAGTTGGACGCGCAGGAGCAGGCCGATTTTCTGCAGTTGTACCTGCAAGCCATGC AGCGCGACTACCCCCCGGCCACCGACGGTAAGGTGTTGTTGCCGTTCCCACGGCTGTTCGTGGTGGCTACCCGCTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GCCGGCGCTTGCGCCAGACGATGTAACCATAAAGGGCGAGGTTGACCACCAGCACCAGCGTGCCCAGCAGCAACTGAGTCCGTTCGGTCAAGCCGGCGGG GTAAATCAAGGGCCAGATGTAATGCTCGACGAAGCCGCCTTCGTAACCGGCATCTCCTGCGGCACTGCGCATGCGGTTTTCCCACGTCGTCAGGGGGCAA CCCAGGTGCAGGCATTCCACGGCCAGGCCCCAGGCCAGGGCTGGCAGGTGAACGAGCAAGGCGCGAGGCCAGCGGATCACCAACAGCCCGCCCAACAGCA CCAGCAGGATGAAGGCCAGGTGCAGTAGGACCAAGGTGTCGGCGGTCAGGCGAAAGAGCATGAGGGCTTATCGCTGGGTTCAGGAACGCTCAGCATAAGA CAATTGATGGGGCAGCACGGGTCTTGTTGCCGGCTAGCCGGCTCCTACAGGTTCGGCGAGGATTGTGTAGGAGCCGGTTTGCCGACGATGTGCTGACTCA
Amino Acid Sequence
>trans-aconitate 2-methyltransferase
MAWSANQYSLFEDERTRAVRDLLAAVPQRAVHHATDLGCGPGNSTEVLLHHCPDAQVVALDNDQDMINKALERQRLRVLRVRCEKADIATWTASKPQDLI LANASLQWLPDHGSLYPHLVHQLCEGGSLAVQTPDNLDEPAHRRLREIASQGPWADKFADHVLPPRHSAAYYYDLLSPLCARVDVWRTTYHHPLAGGAEA VVEWFKGSALRPYLAKLDAQEQADFLQLYLQAMQRDYPPATDGKVLLPFPRLFVVATR
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site