Strain | Pseudomonas sp. VLB120, complete genome. [Details] | |
DNA Sequence Upstream of Gene |
CAATGCCTGCACTGGATCAATCGCCGCCTGGGCCAGGAGCTGACAGTGAGCGTCGAGGGCCACGCGCGAATCATCGGAAGCACAGTGGTCACGTTACTGC TTGAAGGCCGCCGTGGTGCATGCGTGTGGGCCGGCGACAGCCGTTGCTACCTGTGGCGTGGGCATCGGCTGTACCAGCTGACCCGCGATCATTCGCTTGC GCAGCAATTGATCGACCAGCAGCGCATGAGCGCCGAGCAGGCCCGTGGCCACCCCTCGGCACGCGCACTGACCCGTGCGGTGGGCGCCAGTGCCGAGCTC AAGCTGGAGGTGCTGGAGTTCGAAGCGTTGCCGGGCGATGTGTTCCTCCTGTGCAGCGACGGTCTCTACGACAGCCTTCAAAGCGATGGTCTCGGCCACG CCCTGGACCTTGCGTCGCCCGCCGATGCCTTGCAGCGACTGTTTGCTACTGCACTGGGCGGTGCGGCGAAAGACAACCTGACCGCAGTGGTGATCCATCA
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DNA Sequence for Gene |
>PVLB_09940
ATGAGCGGCGACGCACTGGATATACTCGATGCCCTGGAGCAAGGTGGCGACGCCACCTACTTTTCCTTCACCCAGCCGGCCGGCGAGCCGGATCGGGGCA GCAATGGCAAGGGGCGGCGCAAGCGCCGTGGCAAGGGCAGGGCGGCAGAACCGTTGCCTGCAATCCCGGCAGCCGTCGACGTGTTGCCTGTGCCCGAGCT GTTGGCCGGCCGCTATCGCCTCGAGCGGCTGCTGGGGGCTGGCGGCATGGGCCTGGTGTATCGCGCTCGCGACTTGTTGCAGGAAAGCTACGGTGATCCG CAACCGTTGTTGGCGGTCAAGCTGATGAGCGACCAACTGGCTGCCTCGGCAGACGCCAACGCATTGCTGTTCAACGAATACGCGCTTACCAGCCGCTTGC GGCACCCCAACCTGGTGCGGTTGCATGGTTTCGCTGTCGATCCGCAATGCGGGCGCGCCTTCATCAGCATGGAGTTGATGCGTGGTCGTGCGCTTGACCG CGTACTCTGCGACCAGCCCCTGGGCCTGGCGTGGGCAGAGGTGCGTGAAATAGCCGTGCCGCTGCTCGACGCCCTGGCCTGTGTACACGGCCAAGGGGTG GTGCATGGCGATATCAAACCCAGCAATGTGATGCTCGGCGACGATGGCGTGCGTCTGTTCGACTTTGGCCTGGGCATGGCCGTGGAAGGGCCACTGGCCA GGTTGCCGCATTTGAGCTACGGCCGTTTCGAAGCCTGGACACCGGCCTATGCAGCGCCGGAGTTGTTCGAGGGCAGTAATCCCAGCAGGGCCAGCGACCT GTATGCCGTTGCCTGCGTATTGTATGAGCTGGCCTGCGGCCGTCATCCCTTCGAGCGTGTACCCTCGATCAAGGTCCGCGACCAGGCGCTGAGCTCGCGG CTTTCGGTGCCGCTTGGCATGCCGGCCAAGGCCTGGAGCGCATTGCGTGTGGCGCTGGCGTTCGACCCCGAGCAGCGCCGCGTGAGTGCGGCGCAGTTGC GTGATGCCTTTGCCGCCCAAGGACTGTGGGCGCGGCTCAGGAGCATGCGCAACACTCAGTCTTCCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
GGGGTTGTAGCACCGAAGCCATAGCCGCGCAGCATGCCCTGGCGCAGGCCATTGCCCCAGGCATACAGGTGCGCCTGATGCGCAGCGGTCCAGTCCAACG TGTTGCGCGCCAGGGTTAACACCAGGCTATCGCTGTTGCCCGTGGTCAGTCCGAATGCCGGTACCTGTGACTTGCCCGTAAACAGCGCCATGCTGCCCAG TAGCAACACGTACAGCGCCAACAGTTTCAGGTATACGCCCGGAGGCTGCGGCAGCCCCAAACGCAGCAGGTACGCCAGCGTTCTGAACAGGTGCACCACC AACCCGATGCTGATCAGCAGCACGGTGACGCCTGGGGTTACCAGATCGCGGTAGCTGTCACGGCCGAGGGTAGAGAGGTCGTTGCTGGCCTCGACGCGTT GCTTCATCAGTTCGCGGGCGTCGTATTGCAGTGCCGGTCGGTAGACTGTGAGCGCGAAGGCTTCCTTGGTCAGGTAGGCATACAAAGTGATGCCAGCGGG
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Amino Acid Sequence |
>serine-threonine kinase Stk1
MSGDALDILDALEQGGDATYFSFTQPAGEPDRGSNGKGRRKRRGKGRAAEPLPAIPAAVDVLPVPELLAGRYRLERLLGAGGMGLVYRARDLLQESYGDP QPLLAVKLMSDQLAASADANALLFNEYALTSRLRHPNLVRLHGFAVDPQCGRAFISMELMRGRALDRVLCDQPLGLAWAEVREIAVPLLDALACVHGQGV VHGDIKPSNVMLGDDGVRLFDFGLGMAVEGPLARLPHLSYGRFEAWTPAYAAPELFEGSNPSRASDLYAVACVLYELACGRHPFERVPSIKVRDQALSSR LSVPLGMPAKAWSALRVALAFDPEQRRVSAAQLRDAFAAQGLWARLRSMRNTQSS
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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