Pseudomonas sp. VLB120, PVLB_07750
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas sp. VLB120, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
AGTCCTGGGTCAGTTGCAGCGTTTCGCGGGCCTGGGTCAGGCGCTCGTGGATCTGCTCGCGCAGTTCGTCGGCCTGGTCGCCTGCCAGGTTGGCGGTGTC GGCAAGCAGTTTCTCGGTGTCTCGCACCAGTGCCTGGAAGTCAGCCATCAATATCTCTTGTGCATTCTTTGCCGATTTGCTGGCCATGGGGCTCTCCCTT GAGTGTTGGTGAAAATTTCGAGTAACGCGGCGTGGCAAAGGTTCACTGCCAACGCTGGTATGGGCCTTGCTAAGTGTTTTGCCACGTCATGGGGCGATGG CATGGACCGTTGCGCCGATTCAGGGCGACACCCCGGCGGATACCAACAAACCTTAACCCAATCCTCGACAAACCCAAGAAAAAACCACGCAGGCTCCAGC CAGGTCACTGAAACAGGGCAGGGGGCTGGCACCGATTAGGTGCACGGATGCAGGTTCTTGAACTGTCCTGGTGCTTTTTTTCAGCAGGTCTGCCTACGTC
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| DNA Sequence for Gene |
>PVLB_07750
ATGGAAAACATGCACAGCGCGATGGACTCCCTGGTCCATGGCTCCAATACGCTTTTCATCCTCATGGGGGCCATTCTAGTACTGGCCATGCACGCTGGCT TCGCTTTTCTGGAAGTGGGGACCGTGCGACACAAGAATCAGGTCAACGCATTGTCGAAGATCCTCAGCGACTTCGCCATATCGGCCTTGGTGTACTTCTT CATCGGTTACTGGATCGCCTATGGGGTAAGCTTCCTGCACCCGGCGGCGCAGCTGGCGGCCGACCACGGCTATGCACTGGTCAAGTGCTTCTTTCTGCTG ACCTTCGCCGCGGCCATCCCGGCCATCATCTCCGGCGGTATCGCCGAGCGGGCGCGATTCGCCCCGCAGCTGTGCGCAACCGCATTGATCGTTGCGTTCA TCTACCCGTTCTTCGAAGGCCTGGCATGGAACGGCAACCTGGGTGTGCAGGCATGGCTGCAGGCTACCTTCGGTGCGCCTTTCCATGACTTCGCGGGCTC GGTGGTGGTGCACGCCATGGGCGGCTGGCTGGCCCTGGCGGCAGTGGTACTGCTGGGCGCGCGGCGTGGGCGCTATCGGGAGGGCCGTCTGGTGGCGTTC GCGCCTTCGAGCATTCCATTCCTGGCGCTGGGTTCGTGGATTCTGATCATCGGCTGGTTCGGCTTCAACGTCATGAGTGCCCAGACCCTGCAGGGGGTGA GCGGCCTGGTGGCGATCAACTCGTTGATGGCCATGGTCGGGGGAACGCTGGCGGCCCTGCTGGCCGGGCGCAATGACCCTGGCTTCCTGCATAACGGCCC ATTGGCAGGCCTGGTGGCCGTGTGCGCAGGTTCGGACCTGATGCACCCGATTGGCGCTCTGGCCACCGGGCTGGTGGCGGGCGTGCTGTTCGTCTGGAGC TTCACCGCTGCACAGAACCGCTGGAAGATCGACGATGTGCTGGGTGTCTGGCCTCTGCACGGCTTGTGCGGGGTTTGGGGCGGAATCGCCTGTGGCATCT TCGGCCAGGTCGCGTTGGGCGGCATGGGCGGGGTCAGCCTGATCAGCCAGCTTTTGGGCAGCCTGGCTGGTGTGGTGGTGGCGTTGGTGGGCGGTTTCGC GGTGTATGGAACCCTCCGTGCGCTGCATGGCCTGCGTTTGAGCCACGAGCAGGAGTTCCAGGGCGCCGACCTGTCGCTGCACCGCATCGGTGCCACCAGC CAGGATTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GCCGAGTCAGATGCGCATAGGGCGGGACCGACCTAGAATAGAGGCTCTCCCATTCTCTGACCGGACCTGCCCATGCTGCCTGAATGCCAACTGTTCGGCA CCCTCGGTTGCCATCTATGCGAAGTGGCCGAGGCCGTGCTGATGCCTTTCGTCGAGCACGGCCTGCTGGTGGAGCTGGTCGATATCGCCGAAGACGAAGC GTTCTTCGAGCGATACAGCCTGATCATTCCGGTGTTGCGGCGATGCGACAACGGCGCCGAGTTGCGCTGGCCATTCGATGCCGAGCAGGTGGTGACCTTT CTTGGCTGACCTGTGCGAGGGCAGCCTGAATTGACGGAATAGTGAAGCTCTCCGTATGCTGTATATAAATACAGTATCAGGGTGAACTCATGCTCAACGT CGAGCAACTCAAGTACAGCGTCAACCGCATGTCGCCAGACCGGGTATGCGACGCCGTGGTCGAACTGCGTCTTGAAGGCCTGGTGACGGACGACCGCACC
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| Amino Acid Sequence |
>Rh family protein/ammonium transporter
MENMHSAMDSLVHGSNTLFILMGAILVLAMHAGFAFLEVGTVRHKNQVNALSKILSDFAISALVYFFIGYWIAYGVSFLHPAAQLAADHGYALVKCFFLL TFAAAIPAIISGGIAERARFAPQLCATALIVAFIYPFFEGLAWNGNLGVQAWLQATFGAPFHDFAGSVVVHAMGGWLALAAVVLLGARRGRYREGRLVAF APSSIPFLALGSWILIIGWFGFNVMSAQTLQGVSGLVAINSLMAMVGGTLAALLAGRNDPGFLHNGPLAGLVAVCAGSDLMHPIGALATGLVAGVLFVWS FTAAQNRWKIDDVLGVWPLHGLCGVWGGIACGIFGQVALGGMGGVSLISQLLGSLAGVVVALVGGFAVYGTLRALHGLRLSHEQEFQGADLSLHRIGATS QD
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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