Pseudomonas sp. VLB120, PVLB_06050

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0003824 catalytic activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF07685
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0042242 cobyrinic acid a,c-diamide synthase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PTHR43873
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Pathways

Database Xref Pathway Version Evidence PMID
KEGG psv01100 Metabolic pathways 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG psv00860 Porphyrin and chlorophyll metabolism 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Hamap MF_00027 Hydrogenobyrinate a,c-diamide synthase [cobB]. IPR004484 Cobyrinic acid a,c-diamide synthase CbiA 7 422 36.85218
Pfam PF07685 CobB/CobQ-like glutamine amidotransferase domain IPR011698 CobB/CobQ-like glutamine amidotransferase 240 420 3.8E-31
SUPERFAMILY SSF52540 P-loop containing nucleoside triphosphate hydrolases IPR027417 P-loop containing nucleoside triphosphate hydrolase 9 194 2.99E-38
CDD cd03130 GATase1_CobB - - 241 429 1.08399E-72
CDD cd05388 CobB_N - - 8 192 1.81279E-77
Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain 10 188 6.8E-12
PANTHER PTHR43873 COBYRINATE A,C-DIAMIDE SYNTHASE IPR004484 Cobyrinic acid a,c-diamide synthase CbiA 8 429 1.6E-119
Gene3D G3DSA:3.40.50.880 - IPR029062 Class I glutamine amidotransferase-like 237 397 2.5E-10
Gene3D G3DSA:3.40.50.300 - IPR027417 P-loop containing nucleoside triphosphate hydrolase 47 174 3.8E-11
SUPERFAMILY SSF52317 Class I glutamine amidotransferase-like IPR029062 Class I glutamine amidotransferase-like 239 426 9.02E-29

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.