Pseudomonas sp. VLB120, PVLB_05695

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. VLB120, complete genome. [Details]
DNA Sequence Upstream of Gene
CCAGCGCCGACTGGCCGCCGAGGCGGATGAAGAGCTGGCGCGTCTGACCGCGCTCAAGGCCGTCAATCCAAGCGTGCGTGACAGCGAAATCGACGCCCTG CGCAAGCAGCGTGAAGAAGGCTTGGCAATGCTGGATAAGGCAGCCTTGCGACTGGAGGCGATTCGAGTGCTGGTCGCAGGCTGATTATCCGCCGGCTCTG TGGGAGCCTCTTGCTGTCGAGACGGGCCGCGCTCCGCTGCGCGGGAAGCCTGGGGGGCCGCGATGCGGCCCTATCGCGACGCAAGACCGCTCCCACAGCG ATCCGCTACCACATGGGTAAGTCCCGCAAGTTTTCGTTCGCGAGGTCGTTATATCCCTCCGCTATCAGCCCGATGCCGAAATCATTGCTTTCAAAGTGCC ATTAGTCATGAAGGCCTGAATAGCTGTTCCTATACTTTCGTCTGGTCAGTCTCCACCCCGCATTTTGGAGACGAGTGAAAACTCGACGAAGAGGCATGCT
DNA Sequence for Gene
>PVLB_05695
ATGGAATGGCTGGGACTGCAATTGTTCTCCGAGCTTCCTATCAACGGGCAGATTGTCATTGACTGCCGGCATGAGCCGCTACTGATCCTGCTCGCTTATG CCGTGGCCTGTGCCGGGTGTTTCGCCACCCTGGACATGGCAGAACGCCAATGTCACTGCGAAAATGCCAAAGCCCAACGACAATGGCGGGCACTTGGCGC CTTCTGCCTGGCTGGCGGTATCTGGGCCATGCACTTCATCAGCATGCTCGCCTTCCAGGCACCGCTGGAAGTCCACTATGACGTCTCTCTTACCGGCCTT TCGCTCTTGATTGCATTGGTGGTTGCCTGGCTGGCGATGTACAGCCTCAACCGTGTACAAATGCTTGCGCACAACTATTTGCAAAGCGCCCTGCTCATTG GCGCGGGCATCATCCTCATGCACTTCGTCGGCATGGCTGCGCTGCAGACCGGCGCCCAGCAGTATTACCGTACCGACCTGTTGCTGGCCTGTACCGCCAT CGCCTTTCTCACCAGCCTCACCGCCCTGCTGCTGGCGCGGTACTTCCGCAACGGTAGCGGCACTTGGCATTTGGCCATGAAATACGGCGCCAGCCTGGTC ATGGCGGGCGGTATCGTCGCCACGCATTTCACCGCCATGGCCGCGATGACCTTGGTCATACCAGCCGACACGGCCTTGAGCTTGCCTTCGGGTGATAACA GCCTGCAACTGGGCCTGACCATCGCCGTGATCACCTTGCTGATCAGTGGCAGCAGCATCAGCGCCGCGCTGGCCGACAAGAAGCTGCAACGTCAGGAACA CGACCTGCGCCGCTACAGCGTCCTGCTCAACCAGCTCGATCAGGCCCGCGCCTCCCTGCAGCAAGCCGCTCACTACGATGCCTTGACCAATCTGGTCAAC CGCCGAGGTTTCAACGAAGTGTTCGCCGAACGCCTGGCCGAGCATCAGGACCGCCAGAGTCGCCTGGCGGTGATGTTCCTCGACATCGACCATTTCAAGC GCATCAATGACAGCCTTGGTCACGATGCGGGCGATGAGCTACTGAAGGTCATCGCCGACCATATCAAGGCCGCCACCCGCAGTCAGGACCTGGTGGCACG GCTGGGGGGCGACGAGTTCTGCGTGGTCACCAGCCTGAACAACCCCGATGAGGCTCGCCACCTGGCCCAACGCATCATGCAACGCATGAAAGACCCCATC GACCTGGGCGGCCGGCGCATGGTGATGACCACCAGTATTGGCATCAGCATATTCCCGGAAGATGGCCAAACCGCTGAAGAACTGCTCAAGCATGCCGACC TGGCCCTTTATCAATCCAAGGGCTGCGGACGCAATAGCCTGCACTTCTTCAACAGCGGACTGAAGAACCGGGCGACCCTTGAACTGCAACTGGAAGAGGA ACTGCGCATCGCCCTGCTCGAGGAGTGCGGACTGTGCGTGCATTACCAGCCCATCTTCGACCTGCGCACGGGCCAGGTGGCCAAACTCGAAGCGCTGGTA CGCTGGCAACACCCGCAACACGGCCTGCTAAGCCCCGATCGTTTCATCGGCATCGCCGAAGCCAACGGGCTGATCGTCGACCTTGACCTGTGGGTGCTGC ACCACGCCTGCAAGGACCTGGCCCAGCTCAACCGCCACGGCTACACCAGCCTGAAGGTTACGGTGAACTGTTCGGCCGTGACCCTAGGCCGCGAAGAGCT GGCCAATGAGGTAGAAATGGCCTTGCTGGAAGCTGGGCTTGCGCCGCGCCAACTGGAACTCGAGGTGACCGAAAATGCCCTGATGGGTGATGTCCAGCGC ACTGCAGGGCTTTTCAAGCGTATCCGCGCCCAGGGCGTTGCCCTGTCGATCGATGACTTCGGCACCGGCTATTCGTCGCTGGCTTACCTCAAGCGCTTGC CGCTGGATGTGCTGAAGATCGACCGCAGTTTTCTCCAGGACGTGCCCGGCAACCAGAAGGACCGGGAAATCGTCCAGGCGATCATCGTCATGGCCCACAC CCTCCACCTGCAGGTGGTCTGCGAGGGTGTCGAGACCATCGAACAACACGAATTCCTCGCCACCCACGGCTGCGACTACCTGCAAGGGTACCTGCTGAGC CGACCAGTGCCGCTGGCGGACCTGCGGCCGATCCTGGAGCGGCTCGACCGCCAGGAAAGCCGCCTCACTCCTTGTTACGATACAGTTCTACCAGAGTCGC CGGATCTTTTTGCAGATTCCCTTGGCTACCGTGCAAGCGCATCAGTTGCGCGGCGAGGGCGGTAA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
CGGGTGTTGCCGAGCCCTGCTCGCGGGAAAACTTGACGGCGCCATCGAGGTCCTTGAGCAGCGTGCGCACATGCCACTTGATCGGTTCGAAGCGGCTTTC GGCCATTTGCGGCGCCAGGATCTGCAGGGGCTTGGAGTCGGCGAAGCCCCCTGCCAGCGCTTCGGCGATCAAGGTCGCGTCAACCCCTGACCGCTCCGCC AGGGCCACCACTTCGGCAATCACCAAGGCATTGCACGCCACGATCATCTGATTGCAGGCCTTGGTCACCTGCCCCGCTCCCACTGCCCCCATGTGCGTGA CTCGCTGGCCCAGGGTCAGCAGAATGGGTCGAGCGCGCTCAAGATCACTCGGCTCCCCGCCGACCATGATCGCCAGGGTCCCCGCTTCCGCGCCAGGCGT CCCCCCCGATACCGGCGCATCCAGCCAGGCCATGCCACACAGGGCGGCCACTTCAGCAGCCATTTCGCGAGTGGCCGTCGGTTCAAGACTGGAGAAGTCG
Amino Acid Sequence
>diguanylate cyclase/phosphodiesterase
MEWLGLQLFSELPINGQIVIDCRHEPLLILLAYAVACAGCFATLDMAERQCHCENAKAQRQWRALGAFCLAGGIWAMHFISMLAFQAPLEVHYDVSLTGL SLLIALVVAWLAMYSLNRVQMLAHNYLQSALLIGAGIILMHFVGMAALQTGAQQYYRTDLLLACTAIAFLTSLTALLLARYFRNGSGTWHLAMKYGASLV MAGGIVATHFTAMAAMTLVIPADTALSLPSGDNSLQLGLTIAVITLLISGSSISAALADKKLQRQEHDLRRYSVLLNQLDQARASLQQAAHYDALTNLVN RRGFNEVFAERLAEHQDRQSRLAVMFLDIDHFKRINDSLGHDAGDELLKVIADHIKAATRSQDLVARLGGDEFCVVTSLNNPDEARHLAQRIMQRMKDPI DLGGRRMVMTTSIGISIFPEDGQTAEELLKHADLALYQSKGCGRNSLHFFNSGLKNRATLELQLEEELRIALLEECGLCVHYQPIFDLRTGQVAKLEALV RWQHPQHGLLSPDRFIGIAEANGLIVDLDLWVLHHACKDLAQLNRHGYTSLKVTVNCSAVTLGREELANEVEMALLEAGLAPRQLELEVTENALMGDVQR TAGLFKRIRAQGVALSIDDFGTGYSSLAYLKRLPLDVLKIDRSFLQDVPGNQKDREIVQAIIVMAHTLHLQVVCEGVETIEQHEFLATHGCDYLQGYLLS RPVPLADLRPILERLDRQESRLTPCYDTVLPESPDLFADSLGYRASASVARRGR
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site