Pseudomonas sp. VLB120, PVLB_03205
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas sp. VLB120, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
CAGCGACATCGGAGTCGGCCAGCACGGCGTTGGCCTGTGCCAGTACCCATTCGCGGTCGAGCACGCGGAAATCGGTAACGTTGACGGTATCCTGGACGGT CAGGGCTGTTACCGCGGGCGCGGCGTGACAGCCTTGGGCGATCAGGGCTTCGATATCTGCCTGCAGGCCGGCACCGCCACTGGGGTCGTGGCCGGAGAGA CAGAGGACAACGGGGCGGGAGCTGTAGGTATTCATGGTCGGCGAGCTTACCACCAATCCCATTTGCGCGGATCGTCCTACAAACGCTATTTGTTGATCAA TCGGTCAAATTATTGGTTTCGGATGTCTGCAAGCCATTGATCTAGAGCGGTTTCTTTAAAATATGAAGTGGCCCAATGCTATCGTTGAAGGCTATGCTAG AGTGCTCGGATAATTCGACTAACGGGTACTGCCGGGGTACGTCGTCTCAAAGGGATGGGGGGCAACCACGACGCGACCGGACAGGCCATGCTGGGGCTGT
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| DNA Sequence for Gene |
>PVLB_03205
ATGCGCTATTTGCTGATTGTGCTTCTGGGCTGGCTGCCCGTGCTGGCCGGTGCGGTCGAAATAACCGACGCGACCCGGCATCTCCCGCTTGGCAGGGTCA TGCAGGTCTACGAGGACCGCGACGGCAGCGCCAGTATCGCTCAGGTCAGCGCACCTGCGTTCGCCAGCCGTTTCCGCCAGTATGGTCAGGACGTGCTCAA TGCTGGTTACTCGACGTCGGTGTTCTGGCTCAAGTTCGACCTGCGTTACGCCGCTGCCCCGGGTGCGGCGCCGCGTCAGTGGCTTCTTGAACTGGCCTAC CCGCCATTGGACCATCTCGAACTGTATCTGCCTGACGCCAGCGGAGCCTACCGCCTGGCCCAGCGTACCGGCGACGCGCTGCCTTACCACAGCCGGCAGA TACGGCAGAACAACTACCTCTTCGAACTGCCCTTGCGCCCGGGCCAGGCGGTCACGGCCTATCTGCGCCTGCACAGCCAGGGCTCGGTCCAGGCCCCCTT GGCGCTGTGGTCGGCCGAAGCCTACATCGAAGAGCAACCTGCGCGTTTGTACGTGCTAGGGATCATCTACGGCGTTTTGCTGGTGATGCTGGTGTACAAC CTGTTCATCTACCTGAGCGTTCGCGACGTCAGCTACCTCTATTACATTGCCTATATTGCGTCGTTCGGCTTGTATCAGGTATCGGTCAATGGCGCGGGCG TAGCCTACTTCTGGCCCGACAGCCCCTGGTGGGCGAATGCGGCGACGCCGATGTTCATTGGCGCTGCCGGCTTGTTCGGGTGCCAGTTCGCCCGGCATTT CCTGCAGTTGAGCAGTATTGCCCGTGGTTTCGACCGGCTGTTGCAACTGTTGATGCTGGGCGGTGCGCTGGTCATGGTGCTGGCAGTGAGCATGCCCTAT GGCGTCGCCTTGCGCATGGCCACCTTGCTGGCGCTGGCGTTCACCGTGAGCATTTTCGCGGCGGGGCTTTATGCCTGGTGGCATGGCCTGCGGGTGGCGC GCTGGTTCATCATCGCCTGGTCGGCGTTCCTGCTCGGCGGCCTGGTCAACACCCTGATGGTGCTGGGCTATCTGCCGAATGTGTTCCTCACCATGTACGC CAGCCAGCTCGGCTCGGCCCTCGAGGTGGCGCTGCTGTCCTTGGCCCTGGCCGACCGGATCAACAGCCTGCGCGAGCAGCAGGCCAGCACGTTACGCGAC ACGGGGCGGACGTTGGAGCAATTGAACCAGCAACTGGCACGCAGTAACCGCCTGAAGGACGAGTTCCTGGCCACTGTGACCCACGAACTGCGCACGCCGA TGAATGGTGTGATCGGTTCGCTTGAGTTGATGCACACGCTACCTATGGACGCGGAGATGGCTCAGTACCACCGGACGGCGGTGGGCTCGTCGCAGGACAT GATGGACATGGTCGACGACATTCTCACCCTGACCGAACTCCAGGCCGGCCGCCTGCGTGTGCAAGGCACGCCGTTCAGCCTGCGGCGTCTGGTCCAGGAC CTGCGGGCGGGCTACGCCGGGCGTGCGCTGGGCAAGGGTTTGTACCTGAGCCTGGACATTCCTGCAGAATTGCCTGACGCGCTGGTTGGGGACGCGCAGA AGCTGGCCCGCTGCCTGGGTTGCCTGGTGGATAACGGCCTCAAGTTCACCCATCAGGGGGGTGTCATGATTCAAGCCCGAGGCCGGCGTCTTGGCCCGGA CAGCCTGTCGCTGACCTTCACGGTCAGCGACAGTGGCATCGGCTTCGATGACCTGGACCAGGCGATTCTCTACCAACGCTTCTTCCAGGTGGATGGCTCG ATGACCCGACGTTATGGCGGCCTGGGTATCGGCTTGTCGATCTGCCGACAGTTGGGCGAGTTGCTCGGGGCCACGTTGTCCCATGAGTCGACGCGGGGGT TGGGTAGCCGATTCGAACTGACGCTGGAGGTGGCCATCGAGCAGGTGCAGATGCCTCCCGGGCGGACGGCCTCCGGGGCAACGCGGTTCTAG
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GTCATTCCGTCGCCGTCTGTTTAGTCATATTTGTCACTATGACTGCCTGGCAGGGAGTGCTTCACTGGGGTTTCAGGCTTGCCCGGATCCAGGAGCTCGA CGATGAACCTGCACCAGTACGCTGAAACCCACGAAGTGACGAACCAGCCGCCCTCCCTGGATGGCGCCAACCTGTACCGTCTGGACCAGCCGCTACAGGA GTGGTCGCAGCGTTGCGGCGCGGGCTGGGCGGAGTCGCGGATCGACGCCTATGGCGCCCTGGCCGGCGGACCGCTGATGGCGGCTGGCTTTCTGGCCAAT GCGCACAAGCCGGAGTTCAGCAGTCACGACCGTTATGGCCATCGGATCGACCTGGTGGAATTCCACCCCGCGTATCACGAGCTGATGCGCACGGCCGTCG AGCACGGGTTACCTTCACTGCCCTGGGCCGAACCACGCCCGGGCGCCCACGTGGCCAGAGCGTGCATGACCTACCTGCACAGCCAGGCCGAAGCCGGCAC
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| Amino Acid Sequence |
>integral membrane sensor signal transduction histidine kinase
MRYLLIVLLGWLPVLAGAVEITDATRHLPLGRVMQVYEDRDGSASIAQVSAPAFASRFRQYGQDVLNAGYSTSVFWLKFDLRYAAAPGAAPRQWLLELAY PPLDHLELYLPDASGAYRLAQRTGDALPYHSRQIRQNNYLFELPLRPGQAVTAYLRLHSQGSVQAPLALWSAEAYIEEQPARLYVLGIIYGVLLVMLVYN LFIYLSVRDVSYLYYIAYIASFGLYQVSVNGAGVAYFWPDSPWWANAATPMFIGAAGLFGCQFARHFLQLSSIARGFDRLLQLLMLGGALVMVLAVSMPY GVALRMATLLALAFTVSIFAAGLYAWWHGLRVARWFIIAWSAFLLGGLVNTLMVLGYLPNVFLTMYASQLGSALEVALLSLALADRINSLREQQASTLRD TGRTLEQLNQQLARSNRLKDEFLATVTHELRTPMNGVIGSLELMHTLPMDAEMAQYHRTAVGSSQDMMDMVDDILTLTELQAGRLRVQGTPFSLRRLVQD LRAGYAGRALGKGLYLSLDIPAELPDALVGDAQKLARCLGCLVDNGLKFTHQGGVMIQARGRRLGPDSLSLTFTVSDSGIGFDDLDQAILYQRFFQVDGS MTRRYGGLGIGLSICRQLGELLGATLSHESTRGLGSRFELTLEVAIEQVQMPPGRTASGATRF
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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