Strain | Pseudomonas sp. VLB120, complete genome. [Details] | |
DNA Sequence Upstream of Gene |
GACCCTGCTCGGTGACGGCCGCGTGGTGCTGATTCTTGACCTGCTGGGCCAGCTGCGGGGTCAGCAACGGCGTCTGGCACGCCTGCCGGGAGGCAGCGAT GCGCAGCGCCAGGCATTTGGCCCCGCGCCACGACGGGCGCTGCTGGTGATGGTGGTGGACGACTCGGTTACCGTGCGAAAGGTCACCAGCCGCCTGCTGG AGCGTCACGGCATGAGCGTGTTGACGGCCAAGGACGGTGTAGATGCCATGACCCAGCTCGAAGAGCATCGGCCCGATGTGCTGCTGCTGGATATCGAAAT GCCGCGCATGGACGGTTTCGAGGTGGCCACCCGCATTCGCCGCGACGAGCGCCTCAAGGACCTGCCGATCATCATGATCACCTCGCGTACTGGGCAGAAG CACCGTGATCGGGCGATGGCCATCGGCGTCAACGAATACCTCGGCAAGCCTTATCAGGAGTCGGTCCTGTTGCAGAGCATCGCCCACTGGAGCCAGACCC
|
|
DNA Sequence for Gene |
>PVLB_02245
ATGCTTGAACTGATCGCAGGTCAGCGCAGCAGCCTGACCGGGTTGCTGCTGCCCCTGGGGGACCGCACCTTGGTATTGCCCAACGTTGCCGTGGCCGAGT TGCTTGGCCGACGTTCGCTGCCGTGCGAGCGCAACGCGCTGGCCTGGCACCTGGGCTGGATCGACTGGCGCCAGCAGCACTTGCCGTTGATCGGTTTCGA AGCGGCCTGCGGCGGCGAAACCCCCTGTGGCGAACGCGCGCGCATCGTCGTGCTCAATGCCTTGGGCGACACCGGGCTGCGTTACCTGGCGTTGTTGCTG CAGGACATTCCCCGTTCGTGCAAGCTCGACAGCCAGCTCAACTATGTGGATGTGGCGCTGGGCAGCCTGGAGCTGGCAGCGGTGCAGGTGGGCGAGCAGG TGGCGCGGGTGCCGGACCTGGTGGCGCTGGAGCGGTTGGTGCGTGACGCGCAACTGCAACCTGTCGCCAGTTAG
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
DNA Sequence Downstream of Gene |
CATGTGCTTTGGCTGGCCCCTACACACAGCGAGTTGTAGAAGCCGGCTTGCCGACGATAGAGTCGGAATCGACCAAGACAGGAACCCTGCCCACCTCAGG AGGTCTGTGTTTGCATGTATTACGGTGAACGCTTCAACGCCTGGACGCATCTGGTCGGTGCTGTGCTGGCCTGCATCGGCGCCATCTGGCTGATCGTGGT AGCGGGCCTGCAGGGCGACCCCTGGAAAATCGTCAGTTTCTCCATCTATGGCAGCACATTGCTGCTGCTTTACAGCATTTCCACTCTCTACCACAGCACT CGTGGACGGGCGAAAGTGATCATGCGCAAGCTCGATCATCTTTCGATCTACCTGCTGATCGCCGGCAGCTACACGCCATTCTGCCTGGTCAGCTTGCGGG GGCCTTGGGGCTGGAGCCTGTTTGGCGTGGTCTGGGGCCTGGCGGTGATTGGGATGCTGCAGGAAATCAAGCCGCGTTCCGAAGCTCGGATCCTGTCGAT
|
|
Amino Acid Sequence |
>CheW domain-containing protein
MLELIAGQRSSLTGLLLPLGDRTLVLPNVAVAELLGRRSLPCERNALAWHLGWIDWRQQHLPLIGFEAACGGETPCGERARIVVLNALGDTGLRYLALLL QDIPRSCKLDSQLNYVDVALGSLELAAVQVGEQVARVPDLVALERLVRDAQLQPVAS
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|