Strain | Pseudomonas sp. VLB120, complete genome. [Details] | |
DNA Sequence Upstream of Gene |
CGGCTCGGTCGAGGCTATCGCGCATTTGAGCAAAGCCGGCTGGACGGTGGCCGTGGCCACCAACCAGTCCGGCATTGCCCGCGGCTACTACCCGTTGGAA ACCCTTGAAGCCATGCATGCCCGCCTGCGCGCGCTGGTGGCCGAACTGGGTGGCGAAGTGGGTCATATCGTGTATTGCCCGCACGGGCCGGACGAAGGCT GCGATTGCCGCAAGCCCAAGCCTGGCATGCTGCGGGCGATCGCCGAGCACTACCAGGCCGACCTGCGCGGCGTCTGGTTCATCGGCGACAGCAAAGGTGA CCTGGAGGCCGCCCTGGCCGTCGGTGCACAACCCGTGTTGGTGAAAACCGGCAAGGGCGAGCGGACCCTGGAAAAGGGTGTGCCGGAAACTACACTGATT TTCGACGATCTGGCTGCTATCGCCAGAGAACTAATTTAAACAGTGCGCCTTCGGGCGCATTTTTCTCAGGCGGGCGCGCCCCGCAACGGTACATGCCACT
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DNA Sequence for Gene |
>PVLB_00390
ATGTCGATCCTGCAGGCGATCAGAATCTTTCTTTTTTACCTGCTGCTGGGCACCAGTTCGCTGTTGTGGTGCTCCCTGAGCTTTTTCATCGCGCCATTTT TGTCGTTCCCCAAGCGCTATCGCTTCATCAACGTCTACTGGTGCCGTTTCGCCGTGCTGCTGGCGCAAGTGATCCTGGGCATTCGCTACAAGGTCACCGG TGCCGAGAACGTGCCGAATGAGCCCTGCGTGATCCTGTCGAACCACCAGAGCACATGGGAAACGTTCTTCTTGTCCGCCTATTTCTCGCCACTGAGCCAG GTGCTCAAGCGTGAGCTGCTGTACGTCCCGTTCTTTGGCTGGGCCATGGCCATGCTGCGGCCGATCGCCATCGACCGCGACAACCCCAAGGAAGCCTTGC GCCAGGTTGCAAGCAAAGGTGATGAGCTGCTCAAGCAGAAGGTATGGGTGCTGATCTTCCCGGAAGGGACCCGCGTGCCCTTCGGTACGGTCGGCAAGTT CTCCCGTGGCGGCACCGCACTGGCGGTCAACGCAGGCCTGCCGGTGCTGCCGATCGCACATAACGCCGGCAAGTTCTGGCCGAAGGAAGGCTGGGGTAAA CGCTCGGGCACCATCGAGGTGGTGATTGGCGAGCCAATGTATGCCAATGGCACCGGCCCGCGTGCCATCGCCGAGCTCAATGACCGCGCAGCCGCGTGGA ATGAAGCGACCCAACGTGCCATGGGTTCACTGCCGCCAGCAGATGAAAAAGCCCAAGAGCAGATCGCCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
CGATCTGTGGATAACTTGTGTGCAATTTTTGGATGGAATGCTTCAAATAGATGCTAAGTGATTGAATTAGCTATTTATTTCTGTGTATGACATTTTTCTG AAAATCGTGCATAAGTTTTTTCGAGGTATAAGAAAACCGGCTTTTACAGCCGGTTTTTTTATGAGCCTTGCAGGCCAGCCGTCTTGTCAGCGGCAGGGCC CGTGAAACACCTCAGACCTTGTCGATATCCACATCCTTAGTCTCTTTGAGGCAGAAAATCCCCACGACCAGGCTGATCCCTGTCACCAGTACCGGGTACC AAAGGCCGTAGAAGATATCCCCGGTGTATACCACCAACGCGAACGACACCGTGGGCAGGAAGCCGCCAAACCAGCCGTTGCCGATGTGGTAGGGCAGGGA CATCGAGGTGTAGCGGATGCGGGTCGGGAACAGCTCGACCATCACGGCTGCCAGTGGGCCGTAGGTCATGGTCGCGATCAGGATCATCGCCACGATCAGC
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Amino Acid Sequence |
>phospholipid/glycerol acyltransferase
MSILQAIRIFLFYLLLGTSSLLWCSLSFFIAPFLSFPKRYRFINVYWCRFAVLLAQVILGIRYKVTGAENVPNEPCVILSNHQSTWETFFLSAYFSPLSQ VLKRELLYVPFFGWAMAMLRPIAIDRDNPKEALRQVASKGDELLKQKVWVLIFPEGTRVPFGTVGKFSRGGTALAVNAGLPVLPIAHNAGKFWPKEGWGK RSGTIEVVIGEPMYANGTGPRAIAELNDRAAAWNEATQRAMGSLPPADEKAQEQIA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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