Pseudomonas sp. 2-92, U367_RS0117450
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas sp. 2-92(2010) strain 2-92 scaffold8.1, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
ACGACAAGGCCGCTATCGAAGCCAAGATCGAAGAGTTGTCGAAAGTCTCTGCACCGGTTGCTCAGAAAATGTACGCCGAACAAGGTCAGCCAGCTGACGG TGCTGCGCAACAGGCAGAGCCTGAAGCCAAGCACGACGATGTTGTCGATGCCGAGTTCGAAGAAGTCAAAGACCAGAAGTAAGTTGGTCGCCCGGTTGAC CGCTATCAAGCGGTGACTGGTAGGATGTCGCCGCGCGGGAGCTTGCTCCCGCGTTGGCGTGTCTGGGGTATGCGAATTTTTACAGCATGCGACAGTGTTC GGATGCTGGCGGTGTGATCGGGAATGCTCCTGCTTTCCGAGCAGTAAATACCGCACTTTTGGCCGGGTCCCTGGCTAAAAAGTAGTAACGACCAGGATCG TTGAATTGACGTGAGTTGGGTCCGGGCCTGTATTGGGGCTCAACGAGTTTGGCAAGGCTCAGGAGGGTCTGGCTGAACGTCCTTAAGAGTGCAAAGACTT
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| DNA Sequence for Gene |
>U367_RS0117450
ATGGCAAAGCGTGACTATTACGAAGTATTGGGTGTGGAGCGCGGTTCCAGCGAGGCGGACCTGAAGAAGGCCTACCGTCGCTTGGCGATGAAGCACCACC CGGACCGTAATCCGGATAGCAAAGAATCCGAAGAAATGTTCAAAGAGGCCAATGAGGCCTACGAATGTCTGTCTGATCCCAACAAGCGTGCGGCGTACGA CCAGTACGGCCATGCCGGCGTCGACCCGAGCATGGGTGGCGGCGGTGCCGGGTTTGGCGGTCAGAACTTCTCCGATATTTTCGGTGACGTGTTCAGCGAC TTCTTCGGCGGTGGCCGCGGTGGTCAGCGTGGCGGCGCCCAGCGTGGCAGCGACTTGCGCTACACCTTGGAATTGAATCTGGAAGAGGCCGTGCGCGGCA CCAGCGTCAATATCCGTGTGCCGACGCTGGTCAACTGCAAGCCGTGCGATGGCTCGGGCGCCAAGAAGGGCTCGTCGCCCATCACCTGCCCGACGTGCGG TGGTATTGGTCAGGTCCGCATGCAGCAGGGCTTCTTCTCGGTGCAGCAGACCTGCCCGCGCTGCCATGGCCAGGGCAAGATCATTTCCGATCCGTGCGAC TCCTGCCACGGCGAAGGTCGTGTCGAAGAGTACAAGACGCTGTCGGTAAAAGTGCCGGCTGGCGTGGATACCGGTGACCGTATTCGCCTGTCGGGCGAAG GCGAGGCGGGTACCCAGGGTGGGCCTACGGGCGACCTGTACGTGGTGATCAACGTGCGCGAGCACTCGATCTTCCAGCGCGACGGCAAGCACCTGTTCTG TGAAGTGCCAATCAGCTTTGTTGATGCGGCGCTGGGTGGCGAGTTGGAGATTCCGACCCTTGATGGTCGCGTCAAGCTCAAGATCCCTGAAGGCACGCAG ACCGGCAAACAGTTCCGCATCCGTGGCAAAGGCGTTGCGCCGGTGCGCGGTGGTGGCGCTGGTGACCTGATGTGTCGTGTGGCGGTGGAAACACCGGTCA ACCTGAACCGTCGCCAGCGTGAATTGCTTGAAGAGTTCCGTAGCTCGATGGAAGGTGATGACTCCCACTCGCCGAAGACTGCGGGCTTTTTCGATGGCGT GAAGCGCTTCTTCGGCGACCTGTAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GGAATTGAGTATGCGACGTATAGCCGTAATGGGCGCTGCCGGGCGCATGGGCAAGACACTGGTCGAGGCGGTGCAGCAGCGCTCGCCGGCCTCTGGGCTG ACTGCAGCGATTGTTCGTCCTGGCAGCACATTGATTGGTGCGGATGCTGGTGAGCTAGCCTCGTTGGGGCGCATTGGTGTGTCGTTGTCCGGCAATCTGG AGCAGGTGGCGGACGAATTCGATGTGCTGATCGATTTCACCCTGCCCGACGTGATGCTGAAAAACCTGGCGTTCTGCCGCAAGGCGGGCAAGGCCATGGT GATCGGCACCACCGGTTTGACGGCTGAGCAGAAGCAGTTGTTGGTGGAGGCGGGCAAGGATATCCCTGTCGTGTTCGCCGCCAATTTCAGTGTCGGTGTG AATCTGTCGCTCAAGCTGCTGGATCTGGCGGCGCGCGTGCTGGGTGATGAGGCGGATATCGAGATCATCGAAACCCATCACCGTCACAAGATCGACGCGC
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| Amino Acid Sequence |
>molecular chaperone DnaJ
MAKRDYYEVLGVERGSSEADLKKAYRRLAMKHHPDRNPDSKESEEMFKEANEAYECLSDPNKRAAYDQYGHAGVDPSMGGGGAGFGGQNFSDIFGDVFSD FFGGGRGGQRGGAQRGSDLRYTLELNLEEAVRGTSVNIRVPTLVNCKPCDGSGAKKGSSPITCPTCGGIGQVRMQQGFFSVQQTCPRCHGQGKIISDPCD SCHGEGRVEEYKTLSVKVPAGVDTGDRIRLSGEGEAGTQGGPTGDLYVVINVREHSIFQRDGKHLFCEVPISFVDAALGGELEIPTLDGRVKLKIPEGTQ TGKQFRIRGKGVAPVRGGGAGDLMCRVAVETPVNLNRRQRELLEEFRSSMEGDDSHSPKTAGFFDGVKRFFGDL
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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