Pseudomonas sp. 2-92, U367_RS0116255

Gene Ontology

Ontology	Accession	Term	GO Evidence	Evidence Ontology (ECO) Code	Reference	Comments
Biological Process	GO:0000160	phosphorelay signal transduction system	ISM Inferred from Sequence Model Term mapped from: InterPro:PF00072	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Biological Process	GO:0006355	regulation of transcription, DNA-templated	ISM Inferred from Sequence Model Term mapped from: InterPro:SM00421	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Molecular Function	GO:0003677	DNA binding	ISM Inferred from Sequence Model Term mapped from: InterPro:SSF46894	ECO:0000259 match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis	Accession	Description	Interpro Accession	Interpro Description	Amino Acid Start	Amino Acid Stop	E-value
SMART	SM00421	luxrmega5	IPR000792	Transcription regulator LuxR, C-terminal	154	211	5.3E-17
PRINTS	PR00038	LuxR bacterial regulatory protein HTH signature	IPR000792	Transcription regulator LuxR, C-terminal	171	187	3.8E-9
PANTHER	PTHR45566	HTH-TYPE TRANSCRIPTIONAL REGULATOR YHJB-RELATED	-	-	6	213	1.2E-37
Gene3D	G3DSA:1.10.10.10	-	IPR036388	Winged helix-like DNA-binding domain superfamily	150	217	1.6E-17
PRINTS	PR00038	LuxR bacterial regulatory protein HTH signature	IPR000792	Transcription regulator LuxR, C-terminal	157	171	3.8E-9
Pfam	PF00072	Response regulator receiver domain	IPR001789	Signal transduction response regulator, receiver domain	11	125	3.6E-23
SUPERFAMILY	SSF52172	CheY-like	IPR011006	CheY-like superfamily	8	139	8.97E-25
CDD	cd06170	LuxR_C_like	IPR000792	Transcription regulator LuxR, C-terminal	157	213	8.27345E-15
SUPERFAMILY	SSF46894	C-terminal effector domain of the bipartite response regulators	IPR016032	Signal transduction response regulator, C-terminal effector	148	216	5.44E-19
CDD	cd17535	REC_NarL-like	-	-	11	128	1.3781E-33
PRINTS	PR00038	LuxR bacterial regulatory protein HTH signature	IPR000792	Transcription regulator LuxR, C-terminal	187	199	3.8E-9
Gene3D	G3DSA:3.40.50.2300	-	-	-	7	149	1.6E-29
SMART	SM00448	REC_2	IPR001789	Signal transduction response regulator, receiver domain	9	125	5.6E-15
Pfam	PF00196	Bacterial regulatory proteins, luxR family	IPR000792	Transcription regulator LuxR, C-terminal	156	209	8.2E-13

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.