Pseudomonas sp. 2-92, U367_RS0115160
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas sp. 2-92(2010) strain 2-92 scaffold7.1, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
ACACCCGCAACGGCTCGGTGATGTTGATGCGCTCGTCGATGTTCTGGTCCAGCAGCAACTGGATGCGCTCGCGGGACAGCGTCATGGTCTGCTCCGGGGC CGGTAGCCAGACGAATTCGGCGGTGGGAATGATGCCGTCATCGGCCACGTCCATGCCGAAGGAGTCTTCGCTGAAACGCACGATGTACTGGCCTGTCTTG CGGTTGAGGCCAACAAAACCGTGGAGTTGGTCGGCGGCCTGGCAGATAAGCTCGGAGGTGATGCGCATGGTAAACCTCACTGAAAAGTCCCACAGGGACT GGAAAGATGGTTTACACGCGTGGCGGAAAGTACCGCCCTCTAATGGGGCAGCTTCGGGCAAGAATACTGCAATGCCAGGCAAAAAATCCGAGAAAATTGA AGCCTGCGCACGTTAATGTCGGTTTGGTGATAGCGCCTTTCGCAATCAATTGTTAAAAAGGAGGCCTTCTCAAAGCTACCTCCACGAAAGGACTTCGCAT
|
|
| DNA Sequence for Gene |
>U367_RS0115160
ATGCCTGTCACGTTTACCAAGAGCGCCCTGCTGCTCGCTCTGATGCTCGGCCTTGGCCAAGCGCAGGCTGCCGATCCGATCAGCCCGGCTGAATTGGCAA CCAATGAAGGCATTCCGTACCCGGCCGTGATCGCCCACCGTGGTGCGTCCTACGATGCACCGGAGTCCACCGCTGCCGCCTACAAGATCGCCCGCGACCT GGGTGCCGACTACCTGGAAATGGACCTGCAGCGCAGCAAGGACGGCGTGCTGTTCGCCCTGCACGACAACAACCTGCAGCGCACCACCGACGTGGCCACC AAGTTCCCTGATCGCAAGGACGCCCCGGCCAACGAGTTCACCTGGAAAGAACTGCAAACCCTCGACGCCGGCAGCTGGTTCAACGCCGCCTACCCGGACC GCGCACGTCCAGGTTTCGTCGGCCTGAAAATCCAGAGCCTGGACGACATCATCAAGATCGCCGAAGGCAACCCACAGCACAAACCCGGCCTGTACATCGA AACCAAGGAGCCCAAGCAATTCCCGGGCATCGAAGCTGACCTCAAGAACAAGCTGCTCGACAAAGGCTGGCTGAGCTCCGCCGGCTCCAAGCTGGGCAAG AGCAACACCGGCGTCGGCCAGGGCAAGGGTCGCGTGGTGCTGCAAACTTTCGAAGTGGCGAGCCTGAAAGAGCTGCAGAAAGAAATGCCCAACACCCCGA AGATCCTGTTGCTGTGGGTGGGTGAAGGCAGCATCGAGCCGAAGAACAAGCAGACATTTGCTGAATCCGGCGAAACCACCAAGGCCGCCTACTACGCCAA GCAAGAGCCGAAAGACGCGGCCGAGTTCGAAAAGTGGGTCGACGAAGCCAAGAGCCTCGGCGCCATCGGCACCGGTCCCTCGGCTGAGCTGACAGACCAC GGCGACCAGAGCTATTCGGACCTGGTCAAACCGGAAATGAACAAGCTGACCCACGACAAGGGCCTGCTGGTGCACGTCTACACCGTGGACGAGCCGGTGG ACTTCGACAAAGTGATGAAGGCCGGCGTGGATGGCATCTTCACCAACCGCGCCGCCGAACTGCTGAAGTTCTACAAGCGCTGGCCGTCCTCCAGCGTGCA GGACCTGCTGCACGACTATAAGTACTGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
GTGAAGGCCGAATGGTCAGGCCGCCTATGGTTGGGCCGTGACTACGGCCTGATCCTCGGCGAGCTGGGGCGCACCGCGCCCCATGCGCACTACGCCCATC AGTTGATGGCCTCCAAAGGTTCACCGATCACGATCAGCCTCGATGGCCAGGTCACCACGGCCCATCGCCTGTTTATCCCGTCGCGACAAACCCACGCCAT TCTTGAGACTCAAGGTGAGGTCTCGGTGCTGTACGCCGAACCGGCCGTGTTTGATCTCGCCCCTTTGCTGCACCAGGACCTGTCCCTGGAGGCATTGCGC CGACTCCCTCGGCGCAGCCTGGATGATCCACGTCTGGAGCGCGCCCTCACCGCACTGGATCAACAACTCGACGGCAAAGTATCAGCCCAGGTCCTGGCCC AGGCCGCGCACCTGTCATTGAGCCAACTGGAGCGACTGTTCGCCCATCAACTGGGTTTACCTGTGCGTCGTTTGGTGCTGTGGCGACGATTGCGCATCGC
|
|
| Amino Acid Sequence |
>glycerophosphodiester phosphodiesterase
MPVTFTKSALLLALMLGLGQAQAADPISPAELATNEGIPYPAVIAHRGASYDAPESTAAAYKIARDLGADYLEMDLQRSKDGVLFALHDNNLQRTTDVAT KFPDRKDAPANEFTWKELQTLDAGSWFNAAYPDRARPGFVGLKIQSLDDIIKIAEGNPQHKPGLYIETKEPKQFPGIEADLKNKLLDKGWLSSAGSKLGK SNTGVGQGKGRVVLQTFEVASLKELQKEMPNTPKILLLWVGEGSIEPKNKQTFAESGETTKAAYYAKQEPKDAAEFEKWVDEAKSLGAIGTGPSAELTDH GDQSYSDLVKPEMNKLTHDKGLLVHVYTVDEPVDFDKVMKAGVDGIFTNRAAELLKFYKRWPSSSVQDLLHDYKY
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|