Pseudomonas sp. 2-92, U367_RS0128125

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. 2-92(2010) strain 2-92 scaffold6, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
TGCAGGAACACCCGCCCCAAGGGCACACGACTGACATGCACGGCGTCGCCTCCAGCATTTTTCTGCAACGTCTTGAACACCAACCACAACAGGTAAACCA CCCCCGCATACCGAATCAGGTCAAAGGACGGCGGCCAACTGGCAACCAGCGCCGTCACCCCAGTGGCGGTCAAGGCGGTCAGCAGCAGGTCCGCCACGCC GATGCCGAGGGCCGACGCCATCCCACCGCGCCAACCATGGGTCACGCCATGGCTGATCACAAAGGCCATGTTCGGCCCCGGCGACAACAGCAACAACAGC ACAGCACCGGAAAATACCGCCAGGGTCGCAAGGTCGATCATGCTCAAGCCCTCCACCGGGAAAGCCCGCAGATTAGTCCGTGCACGTTAAGCGAACAAAA AATTGTGCTGGATACATTCTTCTCCAGTAATTGCGAATCGCTACGACCAACGTCTAGAATGCGAAACATTATCAATTAAGACAGCTGCGCCAGGATGCCC
DNA Sequence for Gene
>U367_RS0128125
ATGTCGAGCGATCACCCACTGGACCATGCCGCCATCGGCCAGCTTTACCATGCCCATCATGCCTGGCTGCGCGGCTGGTTGAGCCGCCGCACCGGCTGCC GTGAACACGCCGCCGACCTGGCCCAGGAAACCTTCGTGCGCCTGCTCAATGCGCGCCGCCAGCAAACCTTGCAACAACCGCGCGCGTACTTGAGCAGCAT CGCCCGCAGCCTGATGATCGACCAATACCGGCGCCGTGAACTGGAACGCGCCTACCTCGAAAGCCTCGCGCATTTCCCGCAAGTCGAGGTGCCATCGGAA GAAACCCGCCTGTTGATCCTCGATAGCCTGGAGCGCATCGACCGCCTGCTCGACCAGCTCAAGCCGCGCGTGCGCGAGGCCTTTTTGCTGGCGCAACTGG ACGGCCTGACCTGTGCGCAGATCGCCCTGCGCCTGGGTGTGTCGAAGGCCACGGTGGAGCGTGACCTGTCCAAGGCCCTGCACGCGTGTTACCGGTTGCG TTATGTCGAAGGCTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
CGCGCAACTGGTCGACCAGGCCATCCAGTGGATGATCACCCTGCGCTTCAATGTCGCCGACGACGCCGCCACGGCCGCGTTCGAACGCTGGCTGCACACC AGCGCCGAACACCAGCGGGTGTGGCAGCGGGTGGTGACGATGAATGACGATTTCACCCAACTGCCGGCCCAAGTCGGTCGGCATGCCCTGCGTGGGGCGC GCCAACGCATCAGCCGCCGTGAAGGCTTGAAACTGCTGGGCCTGGTGGCCGGCGCCGCCGGTTTGACCTGGCTCGGTCGCGACTACACGCCCCTGCCCGC CTTGATGGCGGACTACCGTACCGCCACCGGCGAACGGCGCTGGGTAGCATTGAACGACGGCAGCCGGATCCAACTCAACAGCGCCAGCGCGATCGATGCG TCGTTCAACGCAGAGCGGCGCCTGGTGCAGTTGCGCCAAGGGGAAATCGTGGTGAATACCGGGACCGACAACCGCCCGTTCTGGGTCCAGACCCGCGACG
Amino Acid Sequence
>RNA polymerase sigma factor
MSSDHPLDHAAIGQLYHAHHAWLRGWLSRRTGCREHAADLAQETFVRLLNARRQQTLQQPRAYLSSIARSLMIDQYRRRELERAYLESLAHFPQVEVPSE ETRLLILDSLERIDRLLDQLKPRVREAFLLAQLDGLTCAQIALRLGVSKATVERDLSKALHACYRLRYVEG
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site