Pseudomonas sp. 2-92, U367_RS0106865
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas sp. 2-92(2010) strain 2-92 scaffold5.1, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
AACGACAACGGGATGCCCAGCTCCAGCAGATGACTGTGCACACCGCGTACCCCGAGGGTGCGCCTGTTGTCGGCGGCGGTGAGCAAGGCGTCGATGACCT TCAGCCGGATCAGGCTGGTGCGCAAGCCAAAACACTTGAGCAGGTGGCGGATACGCTGGTTGCCTTGTTGTTCGGGCGTTTTGCCGAACGCTTGTGCGCC GTTGCCGAAACTGGCCTCGGCAGCCGGTGAATGTCCATCCGTGGGCACTTGCGGGTTGTACATGCAAAAACTCCTTATCAGAGCCTGATCAGGAAAAAAT GAGCGCTCTTAGTTGATAAGACGAACGAGCGAGCGAAATCATGAAGTCCCGGATGTAGAAATTTTGTCAGTATCGGTTTTGTCACATCTGCGCGGCCTTA AATAAACGCGCTGTCGCGCTAAATTATTCCTGGTGATTTGCGTTCTTACGGTGGGGTCATTACCCCTTGTGAGGCGGTTAAATCTGACGGTGGAGTTTGC
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| DNA Sequence for Gene |
>U367_RS0106865
GTGATTATTTCCAATGGGTTGTCCAGGGTATGTGTGGCGGGCGTGTTGCTGGGGTTGAGCCTGGCCGTCTCGGCGCGGGAACAAGTGACGCAAGCCTCGG CGGATATCCGGCGTACCAGTTATGGCGTGCCGCACATTCGCGCCAACGATGAGCGTGGCCTGGGCTTCGGCATCGGCTACGCCTACGCCCAGGACAACCT GTGCCTGCTGGCCAATGAAGTGGTCACGGTGAATGGCGAGCGCGCCAAGTTCTTCGGCCCCGAGCAGGCGACCCTGGAAGAGCGCAACAACCTGGCCAGT GATGTGTTTTTCACGTGGCTCAATACGCCGGAGTCGGTCGCCGCGTTCTGGAAAGCGCAAAGCCCGCAGATCCAACAGCGTATCGAAGGTTACGTGGCCG GCTACAACCGCTACCTGAAAGAGCAGGGCGCTCCGGCGCAGTGCCAGGCGGCGTGGGTGCGGCCCTTGGTGGCTGAAGACTTGGTCAAGCTGACCCGTAG GTTATTGGTGGAAGGCGGTGTCGGCCAATTCGCTGAAGCCCTGGTCGGTGCGACGCCGCCCCAAGCCACAGCCAGTGTATCGACCGACTCGAAAGCCTTT GAATTGGCCGCCGCCAATCAGCAGCGCTTCGCCTTCGATCGTGGCAGCAACGCCGTAGCGGTGGGCCGCGATCGTTCGTTCAACGGGCGCGGCATGCTGC TGGCCAACCCGCACTTCCCGTGGGTGGGCGGCATGCGCTTCTATGAAATGCACCTGACCATCCCCGGTCAGCTGGATGTGATGGGCGCTGCGTTGCCGGG CCTGCCGGTGATCAATATCGGCTTCAACCAGCATGTGGCGTGGACCCACACCGTGGACACGTCCAAGCACTTCACCCTGTATCGCCTGACCCTGGACCCG AAGGATTCCACGCGCTATCTGCTCGATGGCAAATCCGTGGCCCTGGATAAAACCACGGTGACGGTGCAGGTCAAGCAAGCCGATGGCAGCCTCAAGGGCC AGTCGCACACCGTCTATAGCTCGCAATTCGGCCCGGTGGTGCAATGGCCGGGCAAGCTCGACTGGGACAGCCATTACGCTTTCAGCCTGCGTGACGCCAA CCTGGGCAACGACCGCGTGCTGCAACAGTGGTACGCGATGAACCGCGCGGGCAGTCTCGACCAACTGAAAACCTCGGTGCGCACCCTGCAAGGTATCCCG TGGGTCAACACTCTGGCCGCCGATGACCAGGGCCAGAGCCTGTACATGAACCAGTCGGTGGTGCCCAACGTCAGCGCGGCCAAACTCGCACAATGCAGCG ACCCCCGTGCCGGCCTGCAGATGATCATGCTCGACGGCGCCCACAGCGCCTGCGCCTGGGACGTTGACCCACGCGCAGCCCAGGCCGGCATCTTCGCGGC CGACCAACTGCCGCAACTGCAACGCACCGACTACGTCCAGCACTCCAACGACTCGGCCTGGCTAGCCAACCCCAAGGCGCCGCTCACCGGCTTCTCCCCG GTGATCAGCCAGGACCACATCGGCCTTGGCCCACGCGCGCGTTTTGCCTTGCAACGCCTGCAATCCCTGGACAAACCGATCAGCGTCACCGACCTGCAAA ACATGGTGATGGACAACGAGGTGTACCTGGCGAGCCAAGTCATGCCCGACCTGCTCGCATTCTGCGCCAAACACCTCGGCGCCGACGCCACTGCGCTGCA ACCCCTGTGCACCCACCTGAAAAACTGGGACCAACACGCCAACCTCGACAGCGGCATCGGCCTGGTGCACTTCATCAACCTGGTGCAACACCTGCAGCAA ATTCCCGATGCCTGGCGCGTCGCCTTCGACCCGGCGCAACCCCTCACCACGCCACGTGGCCTGGCTATCGAGCGCACCGATGTCGCCAAAGCCCTGCGCG AAGCCATGCTGGCGTCCACCGCCGACGTCGCTAAACTCGGCCTCACCGCCGAAAGCACCTGGGGCGACCTCCAAGTCTCCGGCCAAACCCCGATCCACGG CGGCCCGCAAGAACTGGGGATCTACAACGCCATGCAAACCGTGCCCCGCGCCGACGGCAAGCGCGAAGTGGTCAGCGGCACCAGCTACCTGCAAATCGTC ACCTTTGACGACGAGGGGCCCAACGCCCAAGGCGTACTCGCGTTCTCCGAGTCCAGCAATCCGGCGTCAAAACACGCCAAGGACCAGACCCAAGCCTTCT CCCAGAAAAAGCTCAGCCCGTTGCCCTTCACCGAAGCGCAAATCAAGGCCGACCCGCACTATCAACAGCTGCGCATCAAGGAGTAG
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GGCAGGTACGCAACCCCTTGATGCCAATACGAAATATTTTTGAAATCAAGGGGTTGCACGCTTTGGCAAATACGTACATAATGGCGCCCATCGAACGCAA TGAAGCATTAAAAACTTCAATGTATTCAATGAGTTAGAGTAGAGGCAGGGTTTTACAGCCCACTCAAGTTTTTATCCGGTGAGTGTCAGCAGTCAGGACA TTGATCGTTTGAGGCCGAGTAGCAAAATGGTTATGCAGCGGATTGCAAATCCGCCTACGCCGGTTCGATTCCGACCTCGGCCTCCACTCTTAGAAACCCC GTAGATTAGCGTCTACGGGGTTTTTTATTGGCTTCGAAAACGTTTTGGAAGTCTGGTGCGTTAGGAATTGACTCTGAAACGCCTTGCCATTGCGCAAGGC TTTCTGCCGTTCGTCAAGTACATCGCACTCGCAGACCACTACCTGATCCCATGTTTAAGCGCCGATATCCCGAGCGTAAGAACGGAGAGCCAGCATGGAA
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| Amino Acid Sequence |
>acyl-homoserine lactone acylase subunit beta
MIISNGLSRVCVAGVLLGLSLAVSAREQVTQASADIRRTSYGVPHIRANDERGLGFGIGYAYAQDNLCLLANEVVTVNGERAKFFGPEQATLEERNNLAS DVFFTWLNTPESVAAFWKAQSPQIQQRIEGYVAGYNRYLKEQGAPAQCQAAWVRPLVAEDLVKLTRRLLVEGGVGQFAEALVGATPPQATASVSTDSKAF ELAAANQQRFAFDRGSNAVAVGRDRSFNGRGMLLANPHFPWVGGMRFYEMHLTIPGQLDVMGAALPGLPVINIGFNQHVAWTHTVDTSKHFTLYRLTLDP KDSTRYLLDGKSVALDKTTVTVQVKQADGSLKGQSHTVYSSQFGPVVQWPGKLDWDSHYAFSLRDANLGNDRVLQQWYAMNRAGSLDQLKTSVRTLQGIP WVNTLAADDQGQSLYMNQSVVPNVSAAKLAQCSDPRAGLQMIMLDGAHSACAWDVDPRAAQAGIFAADQLPQLQRTDYVQHSNDSAWLANPKAPLTGFSP VISQDHIGLGPRARFALQRLQSLDKPISVTDLQNMVMDNEVYLASQVMPDLLAFCAKHLGADATALQPLCTHLKNWDQHANLDSGIGLVHFINLVQHLQQ IPDAWRVAFDPAQPLTTPRGLAIERTDVAKALREAMLASTADVAKLGLTAESTWGDLQVSGQTPIHGGPQELGIYNAMQTVPRADGKREVVSGTSYLQIV TFDDEGPNAQGVLAFSESSNPASKHAKDQTQAFSQKKLSPLPFTEAQIKADPHYQQLRIKE
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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