Pseudomonas sp. 2-92, U367_RS0101745
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas sp. 2-92(2010) strain 2-92 scaffold4.1, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GCAGCCGCCAAACAGCATGAAGGTATTGAGCGGGCGCTTGAACAGGTCGGTGTCGGCGGTGGGCTCGGGGCTCCACAGCAGGCTGGTCAGGGCCCAGACG GAGAAGACCAGGAATGCGAGCGCCAGGGGCTCGCGCAGTAACGCTTTCAGCTCCCGGGGGCGCATGCACAACATGAACAGGGTCGGTACGCTGAACAGGA TGTAGACGATTCGATGCAGCACGTTGCGGTTGGATACGAAGAACAGCGAACTCAGCAATAACAACAAGCCAATGGGCAAAATCCACAGGACCAGGAAGTC GAAAACGCGATTTGAGCCATAGATCAGGCGCTTGGAGTGCATACAGTAAAGCCATTCCATTTTGAGAAAGCCAACCATCTTAAAGTAGTGGCTATGTAAT GTCGCTGGTCGGGTCCGACCAGGCTGTGGGTCATGCAGGGTGCAAGTACAACAGAGAAGCTGTGCTAAAGTCAGCCTCCTTTTTCAAAACGCCGCGTGAT
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| DNA Sequence for Gene |
>U367_RS0101745
ATGACCGACTCCAGTCCGAGCGCAAGCCCTTCGAGCTTGAAAATATACTTCCGCCTGCTCAGTTACGTTAAGCCCTACGCCGGCTTGTTCGCGCTGAGCA TCGTCGGATTTCTGATTTTCGCGTCGACCCAGCCAATGCTGGGGTACATCCTCAAGTACTTCGTCGACGGCCTTTCCAATCCTGAAGCCGTGCTGTTCCC CAGCGTGCCATTCCTGCGGGACCTGCAATTGCTGCAGGCCGTGCCGTTGCTGATCATCCTGATTGCCGCCTGGCAGGGCCTCGGTTCGTTCCTTGGCAAC TACCTGCTGGCCAAGGTTTCCCTGGGTCTGGTGCACGACCTGCGGGTGCAGTTGTTCAACAACCTGCTGACACTGCCAAACCGCTACTTCGACAACCACA ACTCCGGGCACCTGATTTCCCGTATCACCTTCAACGTGACCATGGTCACGGGCGCGGCCACTGACGCTATTAAAGTGGTGATTCGCGAAGGCATGACGGT GATCTTCCTGTTCGCCTCGCTGCTGTACATGAACTGGCGCCTGACGCTGGTGATGATCGCCATCCTGCCGTTGATTGCAGTGATGGTGAGCACGGCCAGC AAGAAATTTCGCAAGCAGAGCAAGAAGATCCAGGTGGCCATGGGCGACGTGACCCACGTCGCGTCGGAGACCATCCAGGGCTATCGCGTGGTGCGCAGCT TTGGTGGCGAAGTCTACGAGGAAAAACGTTTCCTCAAGGCCAGCCAGAGCAACACCGACAAGCAACTGCGCATGACCCGTACCGGGGCGATCTATACGCC GGCGCTGCAACTGGTGATCTACACCGCGATGGCGGTGCTGATGTTCCTGGTCCTTTATCTTCGCGGTGATGCTTCGGCGGGTGACATGGTGGCCTATATC ACCTTGGCCGGCCTGTTGCCCAAGCCGATTCGCCAGCTTTCGGAAGTCAGCTCGACGATTCAGAAGGGCGTGGCAGGCGCCGAAAGCATTTTTGAACAGC TGGACGAAGAGGTCGAAGTTGACCGCGGCACGATCGAGCGTGAAAAAGTCAGCGGTCGTCTTGACGTACGCAACCTCAATTTCACCTACCCAGGCACCGA ACGCCATGTGCTCAAGGACATCAGCTTTACCGCCGAGCCTGGGCAGATGATCGCCCTGGTAGGGCGTTCGGGCAGTGGCAAATCGACCCTGGCCAGCCTG ATCCCGCGTTTCTATCATCATGAAAGCGGCGAGATCCTGCTGGACGGCGTCGAGATCGAAAATTACAAGCTGCTCAACCTGCGCAAGCACATCGCCCAGG TGACCCAGCACGTGACGCTGTTCAGCGACACCGTGACCAACAACATCGCCTACGGCGACCTGGCGGGTGCACCTCGGGCGGACGTTGAAGCCGCCGCGGC GGATGCCAATGCCAAGGACTTCATCGACCAGTTGCCCAAGGGCTTCGACACCCAGGTCGGCGAAAACGGCGTGTTGCTGTCCGGCGGCCAACGCCAGCGC CTGGCGATTGCCCGTGCCCTGCTCAAGAACGCGCCGTTGCTGATTCTCGACGAGGCCACCTCGGCCCTCGACACCGAGTCCGAGCGCCACATTCAGGCGG CGCTGGACAAGGTCATGCAAGGTCGCACCACGCTGGTGATCGCGCACCGTTTGTCCACCATCGAGAAAGCTGACCTGATCCTAGTGATGGATGACGGTCG GATTGTCGAGCGTGGCACTCACGGCGAACTGTTGGCCCAGAACGGCTACTACGCCCGCCTGCATGCCATGGGGCTGGATGCGCCTGTTTCCGCCGACATC ACCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GCCTCCCTTGTAGGAGCCGGCTTGCCGGCGATGAGCGCTTAAAGTCCATCGCTGACTTGAGGCCGCCATCGCCGGCAAGCCGGCTCCTACATTGCAAATC CCTCCCGCAATCCTCCTGTAACCCTGTGCTAATATCGCGCCCCTGTTCATTTTGTATGTGGGTTGCTCCATGAAGTTGTCCATGCCGCGATTCGATCAAG CCCCTGTCTTGGTGGTCGGCGATGTCATGCTCGACCGTTACTGGCATGGCGGTACCTCACGGATTTCCCCTGAGGCGCCGGTACCGGTAGTCAAGGTCGA GCAAATCGAAGACCGTCCAGGCGGCGCTGCCAACGTTGCCCTCAATATTGCCGCCCTCGGCGCCCCGGCCTCCCTGGTGGGTGTGACCGGCGACGATGAA GCCGCCGACAGCCTGGCCAATAGCCTGCGCGGTGCTGGCGTGCGCGCGCTGTTCCAGCGCATTGCCCACCAGCCGACCATCGTCAAGCTGCGGGTCATGA
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| Amino Acid Sequence |
>lipid transporter ATP-binding/permease
MTDSSPSASPSSLKIYFRLLSYVKPYAGLFALSIVGFLIFASTQPMLGYILKYFVDGLSNPEAVLFPSVPFLRDLQLLQAVPLLIILIAAWQGLGSFLGN YLLAKVSLGLVHDLRVQLFNNLLTLPNRYFDNHNSGHLISRITFNVTMVTGAATDAIKVVIREGMTVIFLFASLLYMNWRLTLVMIAILPLIAVMVSTAS KKFRKQSKKIQVAMGDVTHVASETIQGYRVVRSFGGEVYEEKRFLKASQSNTDKQLRMTRTGAIYTPALQLVIYTAMAVLMFLVLYLRGDASAGDMVAYI TLAGLLPKPIRQLSEVSSTIQKGVAGAESIFEQLDEEVEVDRGTIEREKVSGRLDVRNLNFTYPGTERHVLKDISFTAEPGQMIALVGRSGSGKSTLASL IPRFYHHESGEILLDGVEIENYKLLNLRKHIAQVTQHVTLFSDTVTNNIAYGDLAGAPRADVEAAAADANAKDFIDQLPKGFDTQVGENGVLLSGGQRQR LAIARALLKNAPLLILDEATSALDTESERHIQAALDKVMQGRTTLVIAHRLSTIEKADLILVMDDGRIVERGTHGELLAQNGYYARLHAMGLDAPVSADI T
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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