Pseudomonas sp. 2-92, U367_RS0126030
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas sp. 2-92(2010) strain 2-92 scaffold2, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
ATACGGTGATCGGCAACGGTGTGAAACTCGACAACCAGATCCAGATCGCCCACAACGTGCAGATCGGTGATCACACCGCCATGGCGGCCTGCGTGGGTAT CTCCGGCAGCACCAAGATCGGCAAGCATTGCATGCTCGCCGGTGGCGTAGGGCTGGTGGGGCATATCGATATTTGCGACAACGTCTTCATTACCGGCATG ACCATGGTCACCCACTCGATCACCGAGCCAGGCGCCTATTCTTCCGGTACCGCCATGCAGCCTGCGGCTGAATGGCGCAAGAGTGCAGCACGGCTGAGGC AGCTCGACGACATGGCTCGACGTCTCAAACAGCTGGAAAAGCGTGTTGGGGACGTGACCCCTGGCGGTAATGCTTCATCAGAAGGCTGATACCATTTCCA TATCAAGTGTGCACAGCCGCTAGACTGCCTCCTTGATTTGCTAGCGGGGCGTGCTTTTAGTTCGCCCGCCCCCAATCTTTATTACAGGCTTCCCCCCGAA
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| DNA Sequence for Gene |
>U367_RS0126030
ATGATGGACATCAACGAGATTCGCGAATACCTGCCTCACCGTTACCCGTTCCTGTTGGTGGACCGCGTAGTGGACCTCAATATCGAGGAAAAGCGCATTC GTGCCTACAAGAATGTCAGCATTAACGAACCGTTCTTCAACGGTCACTTTCCTGCGCATCCAATCATGCCGGGCGTGTTGATCATCGAAGCGATGGCCCA GGCTGCCGGTATCCTTGGTTTCAAAATGCTCGACCTCAAGCCTGCCGACGGTACGCTTTACTATTTCGTGGGCTCCGACAAGTTGCGTTTCCGCAACCCG GTTACCCCGGGTGACCAGTTGATCCTGGAAGCCAAGTTCATCAGCTGCAAGCGCCAGATCTGGAAGTTCGAATGCCAGGCCTCGGTGGACGGCAAGCCGG TGTGCTCCGCCGAGATCATCTGTGCGGAACGCAAACTATGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GTTTGATTGACCCTCGCGCAATCATCGATCCGTCGGCCGTTCTGGCCGCCGACGTTGAGGTCGGCCCCTGGTCGATCATCGGCGCAGGTGTGGAAATCGG CGAGGGGACTGTCATCGGGCCGCACGTGATCCTCAAAGGTCCGACCCGCATTGGCAAACACAATCGCATCTACCAGTTTTCCTCGGTAGGTGAAGACACC CCGGACATGAAGTACAAGGGTGAAGAGACTCGTCTGGTAATCGGTGATCACAACATCATCCGAGAAGGCGTGACCATTCACCGTGGCACCGTGCAGGATC GTGCCGAGACCACCCTGGGTGATCACAACCTGGTCATGGCTTACGCGCACATCGGCCACGACAGTGTCATCGGCAACCACTGCATCCTGGTCAACAACAC TGCATTGGCCGGACATGTGCACGTTGATGATTGGGCGATCCTGTCCGGCTTCACGCTGGTGCATCAGTACTGCCATATCGGTGCCCACAGCTTTTCCGGC
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| Amino Acid Sequence |
>3-hydroxyacyl-ACP dehydratase
MMDINEIREYLPHRYPFLLVDRVVDLNIEEKRIRAYKNVSINEPFFNGHFPAHPIMPGVLIIEAMAQAAGILGFKMLDLKPADGTLYYFVGSDKLRFRNP VTPGDQLILEAKFISCKRQIWKFECQASVDGKPVCSAEIICAERKL
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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