Pseudomonas sp. 2-92, U367_RS0125065
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas sp. 2-92(2010) strain 2-92 scaffold2, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
ATCTGGTACTTCCTGGTACCCGACATGCTGCCGCAGAACCTGCAGGACTGGTACAAACAAGACCTCAACCCGACCACCTCGGCCTACCTGAGCGTTGTCG TGTGCCTGGGCCTGTTCACCGCCGCCCGTGTGTGTGAGCAAGTGCGTACCGGCATCCAGGCGCTGCCACGCGGCCAGGAATCCGCTGCGCGCGCCATGGG CTTCAAGCTGCCACAGATCTACTGGAACGTGCTGCTGCCACAGGCCTACCGGATCATCATTCCGCCGCTCACCTCGGAATTCCTCAACGTCTTCAAGAAC TCCTCCGTGGCGTCCTTGATCGGCCTGATGGAACTGCTGGCGCAAACCAAACAGACCGCCGAATTCTCGGCCAACCTGTTTGAAGCCTTCACCCTGGCCA CGCTGATCTACTTCACCCTGAACATGAGCCTGATGCTGCTCATGCGCCTGGTCGAGAAGAAAGTCGCAGTGCCCGGCCTGATCTCCGTGGGGGGTAAATA
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| DNA Sequence for Gene |
>U367_RS0125065
ATGGACTTCGATTTCAGCGGCATCATCCCCGCTATCCCAGGCCTGTGGAACGGCATGGTCATGACCTTGCAGTTGATGGTCATGGGCGTGGTCGGCGGCA TTGCGCTGGGTACGGTCCTGGCGCTGATGCGCCTGTCGTCCAGCAAACTGCTGTCGCGCGTTGCCGGCGCTTATGTGAACTACTTCCGCTCGATCCCGCT GTTGCTGGTGATCACCTGGTTCTACCTGGCGGTACCGTTCGTGTTGCGCTGGATCACCGGCGAAGACACGCCGATCGGTGCGTTCACCTCGTGCGTCGTG GCCTTCATGATGTTCGAAGCCGCGTACTTCTGTGAAATCGTACGGGCCGGCGTGCAGTCGATCCCCAAAGGCCAGATGGCGGCGGCACAGGCAATGGGCA TGACCTATGGCCAGACCATGCGCCTGATCATCCTGCCCCAGGCGTTCCGCAAGATGACCCCGTTGCTGCTGCAACAGTCGATCATCCTGTTCCAGGACAC CTCGCTGGTCTACACCGTGGGCCTGGTGGACTTCCTCAACTCCGCCCGCTCCAACGGCGACATCATCGGCCGCTCCAACGAGTTCCTGATCTTTGCCGGT GTCGTCTACTTCATCATCAGCTTTTCCGCCTCGCTGCTGGTCAAGCGTCTGCAAAAAAGGTTTGCCGTATGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
TCTCTATCAAGAACATCAACAAGTGGTATGGCGACTTCCAGGTGCTGACCGATTGCAGCACTGAGGTTAAAAAAGGCGAAGTGATCGTGGTGTGCGGGCC GTCCGGTTCGGGCAAATCCACCCTGATCAAGTGCGTCAACGCGCTGGAGCCGTTCCAGAAGGGCGACATCGTGGTCGACGGCACCTCCATCGCCGACCCG AAGACCAACCTGCCGAAACTGCGTTCGCGCGTGGGCATGGTGTTCCAGCACTTCGAACTGTTCCCTCACCTGACCATCACCGAGAACCTGACCATCGCGC AGATCAAGGTGCTCGGCCGCAGCAAGGAAGAAGCCACCAAGAAAGGCCTGCAACTGCTCGACCGCGTCGGCCTGTCGGCACATGCCCACAAGCACCCTGG CCAACTCTCCGGCGGTCAGCAACAACGCGTGGCGATTGCCCGCGCCCTGGCCATGGACCCGATCGTCATGCTGTTCGACGAACCAACCTCGGCCCTCGAC
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| Amino Acid Sequence |
>glutamate/aspartate transporter permease GltK
MDFDFSGIIPAIPGLWNGMVMTLQLMVMGVVGGIALGTVLALMRLSSSKLLSRVAGAYVNYFRSIPLLLVITWFYLAVPFVLRWITGEDTPIGAFTSCVV AFMMFEAAYFCEIVRAGVQSIPKGQMAAAQAMGMTYGQTMRLIILPQAFRKMTPLLLQQSIILFQDTSLVYTVGLVDFLNSARSNGDIIGRSNEFLIFAG VVYFIISFSASLLVKRLQKRFAV
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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