Pseudomonas sp. 2-92, U367_RS0124930
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas sp. 2-92(2010) strain 2-92 scaffold2, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CCGCCCGTGCCCTGGCGCAATTGGGCGCTGAGTTGCTGATCGTCACCAACGGCAACATGGACCCGTACGGTCCCACCCACCGCACCGCGATCATGGCCCG TGCCCAGGAAAACCAGGCGTTTGCGCTGATGGTCAACCGGGTGGAAGCGGGCGATGGTGACCTGGTGTTTGCCGGCGGCAGTGCGTTGGTGGACCCGTTC GGCACGCTGCTGTTTGAAGCGGGGCGTGAGGAGGGGCAATTCGCGGTTGAGCTGGATCTCGACCAATTGGCGGCGGCTCGCACGGACTACCGCTACCTGG ACGACCAGCGCATGAAATTGCCGGGAGAGGTGATTGAGCGCAGCGATGGCGCGCGCGAGCTGTTAATCCCACAAGCTTAACGCTAGCCCCCGTGGCGAGG GAGCAAGCTCCCTCGCCACCGGTAATAACTCTAAAAAACAGTGTGTGCAACACCGACTTCAGTTCTGCCATAAATCTAATAATTGCGCGGAGAATCACCC
|
|
| DNA Sequence for Gene |
>U367_RS0124930
ATGGCTCGTTTGCAACGCACCCTGTCGTTAGGGGCGGTGGTGCTGTTTGGCATCGCCTATATGACGCCGATCATTGTGCTCGGCACCTTCGGCATCCTGG CTCAATCCACCGCGGGCATGGTCCCCGCCGCTTACCTGGCTGCGCTGGTGGCGATGTTTTTCACCGCCATGAGCTACGGGCGCATGGCTTCGGCGTTTCC GGTGGCCGGTTCCGCCTACAGCTACGTGCGCAAGGCCATCAGCCCCAAGCTCGGTTTTATCGCCGGTTGGGCGGTATTGCTCGACTATCTGTTCTTGCCC ATGGCCATCTGGCTGATTGGTGCGGCGTACCTGAACTCAGCCTTCCCGGCGGTGCCGCAATGGGTTTGGGTGCTGGCATTCATCGGGGTTACCAGCGCCA TTAACATCGTCGGCCTCAAACTGGCCAACGGCATCAACGCCTTGCTGATGCTGGTGCAATTCCTGGTGCTGATTGCCTTTGTCGCACTGTGCATTCACTA CATCGGCGGTGATGCAAGCAAGCCGCTGTGGACTATCGCCCCCTTCTTCAATGGCCAGATGCACATGCCATTGATCATGAGCGGCGCGGCCATCGCCTGC TATTCGTTCCTGGGCTTTGACGCGGTCAGTACACTGACCGAAGAAACCCGCGACCCACGTCGCACCATCCCCCGGGCGATCATGTTGATCACCTTGATTG GCGGGCTGATCTTCGTGGCGGTGTCCTACTTTGTGCAGGTGGCCCATCCGTCGTTCGAGTTCAGCAATGTGGATTCGGCGGCGTATGAAATCGCGCGCAA TATCGGTGGCGACTTGTTTGTGTCGATCTTCCTGATTGGCCTGATTGTCGGCCAGTTCGCCTCGGGGCTGTCGGCCCAGGCCAGCGGTTCGCGCCTGTTG TTTGCCATGGGCCGCGACGGTGTGTTGCCCAAGTCGTTCTTCGGCAGCCTGCATGCGCGCTTCGGCACTCCAGTCAACAGCATCCTGTTGTGTGCAGTGG TGGCGCTGCTGGCGTTGAAGCTGGACGTGACCACCTCCACTTCATTCATCAATTTCGGCGCATTCCTGGCGTTTAGCCTGGTCAACCTTTCGGTGATCTT CCACTACTGGATCGGCGCCAAGCAGCGTGGCGTGCGCGAATTGATCCTGTTCCTGGTGTTCCCGTTCATCGGCCTGCTGGCGGACCTGTGGCTGATGGTC AGCCTCGATCACTTGGCGATCTACCTGGGCCTGGTGTGGTTGGCGATCGGCCTGGTTTACCTGAGCGTGCTCACGCGTGGCTTCTCCCGACAGCCACCGG AAATGGACTTCCAGGAAGCCGCATAG
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
AAGCTGCCGGCCTATTCTTATTGCAATCGGTTCTCGTTTGGGTGCACTATTTGTGTTACTGTATAACACATCAAATGCATCCAAACGCCCCGGAGGCCTT ATGAAAGCTGGTATCCATCCCGACTACCGCACCGTGCTGTTTCACGACACCGCCGCCGACGTGTTCTTCCTGATCGGCTCTACTGCCGACAGCGACCGCA CCCACAAGCACAGTGATGGCAACACCTACCCCTACATCCCGCTGGACGTGTCCAGTGCTTCGCACCCGATCTACACCGGCCAACAGCGCAAGACCCAGGC CGAGGGCCGGATTGCCGGCTTCAACAAGCGTTTCGCTTCGTTTGGTTCGAGCCCCAAAAAAGCCGACGCATGAGCGCGACTCGGCGGCGTGTCCTACGCC GCCGTTTGCCGAATCGGCAACACCACCCGAAACGTTGTCCCTTTGCCCAGCTCGCTGCTGACGGAGATGTCGCCACGGTGTTTCTTAACGATGCCGTAAG
|
|
| Amino Acid Sequence |
>amino acid permease
MARLQRTLSLGAVVLFGIAYMTPIIVLGTFGILAQSTAGMVPAAYLAALVAMFFTAMSYGRMASAFPVAGSAYSYVRKAISPKLGFIAGWAVLLDYLFLP MAIWLIGAAYLNSAFPAVPQWVWVLAFIGVTSAINIVGLKLANGINALLMLVQFLVLIAFVALCIHYIGGDASKPLWTIAPFFNGQMHMPLIMSGAAIAC YSFLGFDAVSTLTEETRDPRRTIPRAIMLITLIGGLIFVAVSYFVQVAHPSFEFSNVDSAAYEIARNIGGDLFVSIFLIGLIVGQFASGLSAQASGSRLL FAMGRDGVLPKSFFGSLHARFGTPVNSILLCAVVALLALKLDVTTSTSFINFGAFLAFSLVNLSVIFHYWIGAKQRGVRELILFLVFPFIGLLADLWLMV SLDHLAIYLGLVWLAIGLVYLSVLTRGFSRQPPEMDFQEAA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|