Pseudomonas sp. 2-92, U367_RS0123550
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas sp. 2-92(2010) strain 2-92 scaffold2, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
AATGCAGGCGGACCTGGCGCAAATCGGCCTGAAAGTGAACATCAAAGTCATGGAATGGGGCGAAATGCTCAAGCGCGCCAAGAATGGCGAACATGACATG GTCTCCGCCGGCTGGGCGGGGGATAACGGGGACCCGGATAACTTCCTCACCCCTAACTTGAGTTGCGATGCGGCGAAAAACGGCGAAAACTACGCCCGCT GGTGTAACAAGGAGTTTCAAGACTTGATCGACAAGGCGCGCGCCATCGCTGAACCCACCCAGCGCGCTGCACTCTATGAACAAGCAATGGACGTTTTCGA CAAGGACCAACCGTGGATTCCCATGGCTTACCCGAAAATGTTCACCGCCATGCGTAAAAACGTCGAGGGTTATACCCAAAGCCCTCTGACTACAAATAAC TTCGCCACCACCCAGGTGAAGTAAATAAGAAAAACGCTCGGCACCGTCGACACTGACGGTGCCGAACCTGCCTAACCGGCTGATTGAGGTACACGACAAG
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| DNA Sequence for Gene |
>U367_RS0123550
ATGTTTAGCTTTATTGCCCGCCGACTGGGGTTACTGATCCCCACGTTTTTCGGCATAACGTTGCTCACGTTTGCGTTGATTCGCATGATCCCTGGCGACC CCGTCGAAGTCATGATGGGCGAGCGGCGCGTCGACCCCGAGATGCACGCACAGGCAATGGAACGCCTTGGCCTTAACAAGCCGCTGTATGCGCAATACCT GGATTACGTCGGCAAACTTGCCCAGGGCGACCTTGGCGAATCACTGCGTACCCGCACCAGCGTGTGGACTGAATTCACCGCCCTCTTCCCCGCGACCCTG GAACTGTCCATGGCCGCCCTGTTGTTCGCCGGTATCCTGGGCCTGTTGGCCGGGGTGATCGCGGCACTCAAGCGAGGATCCCTGTTCGACCATGGGGTGA TGGGCATCTCCCTGGCGGGATATTCGATGCCGATCTTCTGGTGGGGCCTGATCCTGATCATGTTCTTCTCGGTCAGCCTGGGTTGGACCCCGGTTTCCGG GCGGATCGACCTGCTCTACGACATCGAGCCACGCACCGGCTTCATGCTGATCGACACCCTGTTGGCTGACGAGCCGGACGCCTTCTTCGACGCCCTGCAC CACCTGATCCTGCCGGCCATCGTGCTGGGCACCATCCCGCTGGCGGTGATCGCGCGAATGACCCGTTCGTCGATGCTCGAAGTACTGCGCGAAGACTACA TCCGCACCGCCAAGGCCAAGGGCCTGTCGCCGGCGCGTGTGGTGTTCGTGCACGGCCTGCGTAACGCGCTGATTCCGGTATTGACCGTGGTTGGCCTGCA AGTCGGCACCCTGCTGGCCGGCGCGGTTTTGACCGAAACCATCTTCTCCTGGCCCGGCATCGGCAAATGGCTGATCGAAGCCATTGGCGCGCGGGACTAC CCGGTGGTGCAGAACGGCATCCTGCTGATCGCCTGCCTGGTGATCCTGGTGAACTTCGTGGTGGATATCCTCTACGGCTTCGCCAACCCACGCATCCGTC ACCAGCGCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GATCATGACCATGACCACACCTACTCAAGTGTCAGCAGTCGATCAAAGCCTGCTGTACCCGTCCCCGTACAAAGAATTCTGGCAAGCCTTCTCCAAGAAC AAAGGCGCGGTTGCCGGCCTACTGTTCATGTTGCTGATCGTGTTCTGCGCGATCTTTGCCCCGTGGGTTGCACCGCATAACCCAAGCGAGCAGTACCGCG ACTTCCTGCTGACCCCGCCGGCCTGGCTGGAGGGTGGGCAGATGCAATTCCTGCTCGGCACCGACGAACTGGGCCGTGACTTGCTGTCGCGCCTGATCCA GGGCTCGCGCCTGTCGTTGCTGATCGGTTTGTCGTCGGTGGTGATGTCGCTGATTCCGGGGATCCTGCTGGGTCTGTTCGCCGGGTTCTTCCCGCGCCTG CTCGGTCCGACCATCATGCGCCTGATGGACATCATGCTGGCCCTGCCGTCGCTGCTGCTGGCTGTCGCCATTGTCGCGATCCTCGGCCCTGGCCTGATCA
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| Amino Acid Sequence |
>peptide ABC transporter permease
MFSFIARRLGLLIPTFFGITLLTFALIRMIPGDPVEVMMGERRVDPEMHAQAMERLGLNKPLYAQYLDYVGKLAQGDLGESLRTRTSVWTEFTALFPATL ELSMAALLFAGILGLLAGVIAALKRGSLFDHGVMGISLAGYSMPIFWWGLILIMFFSVSLGWTPVSGRIDLLYDIEPRTGFMLIDTLLADEPDAFFDALH HLILPAIVLGTIPLAVIARMTRSSMLEVLREDYIRTAKAKGLSPARVVFVHGLRNALIPVLTVVGLQVGTLLAGAVLTETIFSWPGIGKWLIEAIGARDY PVVQNGILLIACLVILVNFVVDILYGFANPRIRHQR
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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