Pseudomonas sp. 2-92, U367_RS0123460
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas sp. 2-92(2010) strain 2-92 scaffold2, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
AGCCCGCAGTGGTTTCAAGCGCTGTTGGAACAGTTGAAACGCTGTGGCTTGAAAGTCGCCCTGGACACCAGCGGCGAAGCGCTGCGCGCCGGTTTGAAAG CCGGCCCGTGGCTGGTCAAACCCAATACCGAAGAACTGGCCGATGCACTGGGTAATGCCCCGGATGCCATCAGCCAATTGCATCAACAAGGCGTGGAACA CGTAGTGGTTTCCGACGGTGCCGCAGGCGTGAGCTGGTACAGCCCAGGCGCTTCGTTGCACGCCACACCGCCCAAGGTCGTGGTCGCCAGCACCGTCGGC GCCGGCGACTCGCTACTGGCCGGGATGCTCCACGGTCTGCTCACGGGTGATACGCCGGAGCAAACCTTGCGCCGCGCCACGGCGATTGCCGCGATGGCGG TGACGCAGATCGGTTTTGGCATCAGCGATCACGCGCAGTTGGCGCGCCTCGAAAGCGGCGTCCACGTGCGCGCGCTGACAGAACAATAAGAGGGTTTGTG
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| DNA Sequence for Gene |
>U367_RS0123460
ATGAAGTTAGCCATTGTTACCGCCTGCCCGAACGGCATGGTCACCAGTGTGCTGTGCGCCCGCTTGTTGGACGCCGCCGCACAGCGCCAGGGCTGGAGCA CCAGCGTTGAAGTGGTGGATGTGCAGCGCCCGGAACGCCAGTTGTCCCAAGCCACGATCGACGACGCCGAATGGGTGTTGCTGGTCAGCAGCACCCCGGT GGCTATGCAGCGGTTTGTCGGCAAGCGCGTGTTCCAGAGCACGCCGGCCCAGGCGCTGGCGGATGTCGACGCCGTATTGCGGCGCGGCGCCGAAGAGGCG CAGGTGCATGTCGCCACCGAACACGCGGCCAAAAAAGCGCCGCGTATTGTTGCGATCACCGCTTGCCCGACGGGCGTCGCCCACACCTTCATGGCGGCCG AGGCCTTGCAGCAGACCGCCAAGCGTCTGGGCTACGACTTGCAGGTCGAGACCCAAGGCTCGGTCGGTGCCCGTACACCCTTGAGCCCGCAGTCCATCGC TGATGCAGACGTGGTGTTGCTGGCCGCCGATATTGAAGTCGCCACCGAGCGCTTCGCCGGCAAGAAGATCTACCGTTGCGGCACCGGCATTGCCCTCAAG CAATCCGAAGCCACCCTTAACAAAGCCCTTGCTGAAGGCTCGGTGGAAAGCGCGGCCAGCGGTACCGTGGCCAAGAAGGAAAAAACCGGCGTCTACAAAC ACCTGCTCACCGGGGTGTCGTTCATGTTGCCGATGGTGGTGGCGGGTGGATTGTTGACCGCCTTGTCATTCATGTTCGGCATCACGGCGTTTGAAGAGCA AGGCACCCTTGCCGCCGCGTTGAAAACGGTGGGTAACCAGGCCTTCATGTTGATGGTGCCGCTGCTGGCGGGCTATATCGCCTACTCCATTGCCGACCGT CCCGCCCTGGCCCCCGGCATGATTGGCGGGCTGCTGGCGACGACCCTGGGTGCAGGCTTCATCGGCGGGATATTCGCCGGTTTCCTCGCCGGCTACTGCG TCAAGCTGATCAGCCGCGCGGTGCAACTGCCGCAGAGCCTGGATGCGCTCAAACCGATCCTGATCATCCCGTTGCTGGCGAGCCTGTTCACCGGCCTTGC GATGATCTATCTGGTCGGGCCGCCGGTGGCGCGGATGCTGGTGGGCCTGACGGGATTCCTCAACACCATGGGCACCGCCAACGCCGTGCTGCTGGGCGTT CTGTTGGGCGGCATGATGTGCGTCGACCTTGGCGGGCCGATCAACAAGGCCGCCTACGCGTTCTCGGTCGGCATGCTCGCCGAGCACAGTGGCGCGCCGA TAGCCGCGGTGATGGCCGCGGGCATGGTGCCGCCCATCGGCATGGGCATCGCCACGTTCCTGGCGCGCCGCAAGTTCGCCCAGACGGAGCGGGAAGCTGG CAAGGCCGCGATCATTCTCGGGATGGTGTTCATTTCCGAAGGTGCGATTCCCTTTGCGGCTAAAGATCCGCTGCGCGTGATCCCGGCCAGCATCGCCGGT GGCGCGTTGGCCGGTGCCTTGTCGATGTACTTTGGTTGCAAACTGGCAGCGCCCCACGGCGGGCTGGCGGTGCTGGTGATCCCGAACGCGATGAACCATG CGTTGCTGTATTTGCTGGCAATCGTTGCCGGTAGCCTGCTGACGGGGTTGGTGTACGCGCTGATCAAACGCCCCGAAGCGCAAGAGCTGGCCGTCGCCCC AGCCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
CCCTGTAGGAGCCGGCAAGCCGGCTCCTACAGAGGGTGTCATCTGGCTTTCATCCCGACGTGGTTAAGTTTCCCTTTTGATACTCAAGAGGGCACCTGCA TGAGCCACTTCGATCTTGGCCGCCGCCGCGTTATGCAAGCCGTCGGCGCCGGCCTGTTGTTGCCGGGCCTGGCCCCGGCGGTGATTGCCTCGGTCAAGGA CCGACCGCAACTCACCGACGGCGTGCAGTCCGGCGACCTGCTCGGTGATCGCGCCATGATCTGGAGCCGCAGCGACCGCCCGGCCCGCATGGTGGTGGAG TGGGACACCCGCAGCGTATTCAGCAACCCGCGTCGATTTGTTTCGCCCTTGGCCGATAACCGCACCGACTTTACCTCCCGCGTCGAACTCACCGGGCTGC CCGCCGACCAGGCGATTTTCTACCGCGTGCACTTCGAAGATGCCCAGACCGGCATCGCCAGCGAACCCTGGTTTGGCCACCTGCGCAGCGTGCCGCAACA
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| Amino Acid Sequence |
>FruA
MKLAIVTACPNGMVTSVLCARLLDAAAQRQGWSTSVEVVDVQRPERQLSQATIDDAEWVLLVSSTPVAMQRFVGKRVFQSTPAQALADVDAVLRRGAEEA QVHVATEHAAKKAPRIVAITACPTGVAHTFMAAEALQQTAKRLGYDLQVETQGSVGARTPLSPQSIADADVVLLAADIEVATERFAGKKIYRCGTGIALK QSEATLNKALAEGSVESAASGTVAKKEKTGVYKHLLTGVSFMLPMVVAGGLLTALSFMFGITAFEEQGTLAAALKTVGNQAFMLMVPLLAGYIAYSIADR PALAPGMIGGLLATTLGAGFIGGIFAGFLAGYCVKLISRAVQLPQSLDALKPILIIPLLASLFTGLAMIYLVGPPVARMLVGLTGFLNTMGTANAVLLGV LLGGMMCVDLGGPINKAAYAFSVGMLAEHSGAPIAAVMAAGMVPPIGMGIATFLARRKFAQTEREAGKAAIILGMVFISEGAIPFAAKDPLRVIPASIAG GALAGALSMYFGCKLAAPHGGLAVLVIPNAMNHALLYLLAIVAGSLLTGLVYALIKRPEAQELAVAPA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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