Pseudomonas sp. 2-92, U367_RS0117050
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas sp. 2-92(2010) strain 2-92 scaffold13.1, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GAGATTTTTGCCCAGACCGATATGGCGAGTTTGCGCAGCAAGTCCCTGGCGTTGACCGACCTGTTTATCGCGTTGGTCGAAGCCCGTTGCGCTGCCCATG ACTTGAAGTTGATCACCCCACGTGAGCACGCCAGGCGCGGCAGTCATGTGAGCTTCGAACACCCCGAAGGCTACGCGGTGATCCAGGCCTTGATCGCCCG TGGGGTGATCGGTGACTACCGTGAGCCGCGCATCATGCGGTTTGGTTTTACGCCTTTGTACACCAGCTTTACCGAGGTGTTTGACGCCGTAGAAATCCTC GGCGACATCCTCGACCACCACACCTGGGACCAGCCGCAATTCAAAGTTCGCAACAGCGTCACTTAAGAACGACCCCTCCCTTGTAGGAGCCCGGCTTGCC GGCGATAGCGGCCTTGAGATCGCCATCGCCGGCAAGCCGGGCTCCTACACAGGACGGCGCAAATTTCCTGTGCAATCACAATAATAAAGGGGCACCCCAC
|
|
| DNA Sequence for Gene |
>U367_RS0117050
GTGACCACGCCAGACAACGGCTTTGCAGAGATCACCCACCGCGAACTGGGCCTGCGGCGCCAGCTCACTTCCGGCCAGATGAGCATGATCGCCATCGGCG GCGCCATTGGCACTGGGCTGTTCATGGGCAGCGCCTACGCCATCGGTTATGCCGGGCCCAGCGTCTTGGTGAGCTATGCCATTGGCGCATTGATCACCTT GCTGTTGATGGGCTGCCTGGCGGAGATGACGGTGGCCCATTCCACCTCGGGCTCCTTTGGTGCGTACGCCGAGTTCTACATCAGCCCGCTGGCCGGGTTC CTGGTGCGTTATGCCTACTGGGCGGCGATTGTGCTGGCGGTGGGCGCCGAGGTCACAGCGGTGGCGATGTACATGAAGTACTGGTTCGCCAACGTACCGG AATGGGTGTGGATCGTGTCGTTTTCCAGCGTGCTGATCCTGCTCAATGCGATCAGCGTGAAGACCTTCGGCAACTTCGAATACTGGTTTTCGACGATCAA GATCAGCGCCATTGTCGGCTTCATCATCCTCGCCGTGTACGTGGTGTTCGGCTCCGGCAACCCGGAATACGGGGTGCAGAACTACACGGCCCACGACGGC TTTTTCCCCCATGGCCTGAGCGGTATGTGGATCGCGGTCATCGTGTCGATCTTCAGCTACCTGAGCGTGGAGATGATTGCCGTGGCGGCCGGTGAAGCCG CTGATCCGGAACAGGCGGTGAAGAAAGCCTTCCGCGCCACCATCGTGCGGCTGGTGGTGTTTTACCTGCTGACCCTGGCGCTGATGCTGGCCATCGTGCC TTGGAACCAGGCTGGACAAACCCAGAGCCCGTTCGTCACGGTGATGCAGACCATCGGCATTCCCGGCGCCACCGGGGTGATGAACTTCGTGATCCTGATC GCGGCGCTCTCGGCGATGAACAGCCAGCTCTACATCACTACCCGCATGATGTTCAGCCTGTCCCGCGCCGGCTTTGCCCCCAAATCCATGGGTGCGTTGA GCAAGAGTGGCATCCCGCTGAACGCGTTGCTGTTGTCCAGCTCGGGCATTGCGCTGGCGACGTTGCTCAACGTCGTGTACCCGGAAAGCTCGTTCACCCT GATGATGGCGATCTCGATGTTTGGCGCGATCTTCACCTGGTTCATGATCTTCCTCACCCACCTGTTTTTCCGTCGCTACCGCAAGCGTCACGGTGGGCCG AAGCTGTCGTTCCAACTGCGGCTGTTTCCCTACAGCACGTCGCTGGGTCTGGTGCTGATGGGCGCGGTGATGATCACCACGTATTTCACCGAGGCGTTCA AGATGACCCTGGTGTTTGGTGTGCCGTTCCTGTTGATTCTGTCGGCGGTGTATTACGGGTTTTTCCGCAAGGGCAGGGCCAAGGCGTCGAACAAGGCCTT GGCATAA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
CCGGGCAGCTGTTCGAACGAGCGCGCGCATAACAGCAGTTTCCGACAGGCCCACTCTTCTTGCAGAGGGTGGGCCTTGAAGGTGCGCTTCTGCGGCCAGC GCTCCAGCGCGGCTTGGGGCACGATGCCCAAGCCAGCGCCACGGGCGACCATGCGAATCACCCCGTCAAAGCCCTCGGCACGGATGCGAGTCTGCAGGCG GAAACCCGCGTGCAGTGCCTGTTCTTCGAGGTAAACCGTCAACGCGCTGTGCGTGGCGAGGCCGATAAATTCGTGTTGCAGGCTATCGACAAAACTCCCC TCGGCGAACGGATGATCCAGTGGCGCGATCAGCACCAGCGGGTCATCACGGAAGGGCTGGGTCTGCAGGCCGTGGGTGTCCACGGCGTCGGAGATGATCC CCAGATCCGCCGTGCCCTGGCGCAAGGCCTGGGTGATACGCAGGCTTGGCAGCTCTTGCAGGTCGATGTCGAGGTTGGGGTGCTCGCATAGAAAGTCTGC
|
|
| Amino Acid Sequence |
>amino acid permease
MTTPDNGFAEITHRELGLRRQLTSGQMSMIAIGGAIGTGLFMGSAYAIGYAGPSVLVSYAIGALITLLLMGCLAEMTVAHSTSGSFGAYAEFYISPLAGF LVRYAYWAAIVLAVGAEVTAVAMYMKYWFANVPEWVWIVSFSSVLILLNAISVKTFGNFEYWFSTIKISAIVGFIILAVYVVFGSGNPEYGVQNYTAHDG FFPHGLSGMWIAVIVSIFSYLSVEMIAVAAGEAADPEQAVKKAFRATIVRLVVFYLLTLALMLAIVPWNQAGQTQSPFVTVMQTIGIPGATGVMNFVILI AALSAMNSQLYITTRMMFSLSRAGFAPKSMGALSKSGIPLNALLLSSSGIALATLLNVVYPESSFTLMMAISMFGAIFTWFMIFLTHLFFRRYRKRHGGP KLSFQLRLFPYSTSLGLVLMGAVMITTYFTEAFKMTLVFGVPFLLILSAVYYGFFRKGRAKASNKALA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|