Pseudomonas sp. 2-92, U367_RS0104750

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. 2-92(2010) strain 2-92 scaffold12.1, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
TTACAGCGCTGTTTAGGGTCAGCGCGAAGAATAAGGAATGCCGCCGTGATGACACTCACTCAAGGTTCGATGCAGGTACTGCTGATCAGCTGCGTACTCA GCGCCAGCATCAGTGTTCCAGCCCTGGCGGGTGACGGCGTGATCGTGACGGGCCGAGACGTACAAGGCCACATGTATGGCCGAGCCTCCTTTGGCCCCGA CCCTTATCCCCAGACCGCCAATGCCAATCCCAGCCGAGAAATCATTGGCGCCCTGTCGGGCGAGTTGAGTGACCGTGACTTCGGAAACATCAATAGCGGC TTGGGCATCACTCGGGCCATGCAGCCCAACGGCAACCTCACCGGCTTGAGTGCCACACAAAACAGTATGTCCACCCTGGGCGCTGGCGCAGCCGCCAGCC GCTCGGGTGGCAGCGGCAGCATGGGCGGTCAGATCAGCGACTCGATCCAGCGTGGCCTTGCGCCCCTCAACAACATCGGCAGCATGATGGGGGGCAAATA
DNA Sequence for Gene
>U367_RS0104750
ATGAACCGTCCCCTTCTCCTGTTGGCCCTGCTGGGCAGCACCGCGGTAATGGCGGACAACACCGCAGTGATCAACAACAGCGGTAAAGACTACCGCGGCA ACCTGATGGTCAACCAGGCCGCGGGCAATCAGCAGCAAACCGCCAACAACCGCGCCGTCGCGCTCGGCGGCCAGGCCACCACCAGCAATATCCAAAGGAT GGACGGCAACGTCGACCCTTCCCTGAACGCCAACGCGGCGATCGAGGGCACTTCTTTCAGCAATGGCAACGGCATGTTGGGCATCAACCAGTCCGCCGGG GCCAACAACCAATTAGTCAATGCCGTGCGGATCAGCGTCAACCCTGGCCCGCAAAGCATCGACGACAGCGTCCTGTTGCAACAGAACACGACGACGCTGG CAACCGACTCAGGGCTCACCCCCACCACTGGCAGCCGCCAGGTCGTGACAAGCGACCAGGCCTTCACCGGCAGCCGAGGAGTGATTCAGGTGAACCAGAG TGCCGGGGTGGGGAACCGAGTGGCTAACACCCTGGGCATCACTATCAAGTAA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
CCGCTTGGTAGCACTAGTTAGACCGTACCAACACTTAACCAACTAATTAGAAGCAAGGAGAAACACCATGAAACCTCAAATGGCCCTGAAACCAATGGTT TTCGCTCTCGCCGCACTCATGGCTGCTGCTGCTCAAGCAGGTGGCTGGCACCCTGCGCCTCAACCAACCGGTGTGGTTGCCTCCGTGGTTACGGATGTGC AAAACAGCGCCGGCAACAAATTCGACGATACCAAAACCGAAAATAACAGCTCAGCTGATAACTCGGTCAACAGCAACAGCGGTAACGTCGGTGTAAACAT TCAATCCGGCAGTGGTAACCAGGCGGACAACTCTGGCGCCATCTCCAGCGCTAAAGGCGACTTCTTGACCGTGTTTGCCGTAGTCGATGTGAATCAAAAC AGCGGTCTGAACAACTTCGTCAACAAAGGCACGCAAAACAACGCCTCCCTGGATAACTCCGTTAATCGTAACTCCGGCAACGTGGGTTACAACGGCCAGG
Amino Acid Sequence
>autotransporter adhesin
MNRPLLLLALLGSTAVMADNTAVINNSGKDYRGNLMVNQAAGNQQQTANNRAVALGGQATTSNIQRMDGNVDPSLNANAAIEGTSFSNGNGMLGINQSAG ANNQLVNAVRISVNPGPQSIDDSVLLQQNTTTLATDSGLTPTTGSRQVVTSDQAFTGSRGVIQVNQSAGVGNRVANTLGITIK
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site