Pseudomonas sp. 2-92, U367_RS0102935
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas sp. 2-92(2010) strain 2-92 scaffold11.1, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CTTGGCGTGCTGGGCCAGCAAGGCGCGCACCATGGACGATTTACCGGTGCCCCGCGACCCCCACAGCAGTGCATGGTTGGCGGGCAGACCGTCGATGAAT TGCTGGGTGTTGCGCGCCAGTGTTTCACGTTGTTTGTCCACGCCGATCAGGTCGGACAGGCGCATCTCCAGGCTCACATCCAGCGGCAGCAGGAAACCAC TGCGCCCTTCACGCTGCCAGCGGGCAGCCAGGCATTGGTTCCAATCGATGGTTTGGCGGGGCGCGGGCAACAGGGGTTCCAGGCGGGCGAGCACTGCATC GGCTCGCTCAAGAAAAGCACTCAATCGAGAATCCACAATTATTCCTCTGGCAAGTTCTTGCAAAAGATGGCGTATTGGCAACCCTGCGGCAGACCGCACG AGGCTGCGTAAAAAAACGATTCATGCCGGGTAAGCCAGAGCCTGTGGATGTTCAGCTATGCTTGCCGGGCGAAGGGAAACGTGAAGTGGTTCGACACTCA
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| DNA Sequence for Gene |
>U367_RS0102935
ATGGATATCAAGTTCGCCCACCGCTTGTCTTATAAACAAGCCAGATTGACTGTGCTGGTCGGTTTCGTCTTGGGAACCTTGCTCAGCCTGATCCAAATCG GCATTGATTATGCCAGCGAAGACGCATCCATCAACCGTGAAATTCGCTCGCTGATCGAAATCAGCCACAACCCCGCCTCACGCATCGCCTATAACATCGA CGCCGAACTGGCCCAGGAACTGACCTTGGGCCTGCTGCACTCCCCCGCCATCATTCATGCCCAGTTGATCGACAACAACGGCGTGGTGCTGGCCGATGTC GACCGCCCGCGTAAAGAAAGCACTTACCGCCCCGTCAGCGATTTCCTGTTCGGCGCCAACCGTCAGTTTGAAGACCGGTTGTTCCTCAGCCACATGCCCA ACGAGTCCCTCGGTGTGCTGCGCCTGGACGTGGACACCTATGCCTTTGGCAGTCGCTTCCTGCGCCGTGCCGAGATCACCTTGCTAAACGGCTTCGTCCG CAGCCTGTTGCTGACCGGCATTCTGTTGGGCTTGTTCTACGTGATGCTGACCCAGCCGTTGGTGCGCATCATCCGCGAGCTGAGCAACCGCCGACAGGCA CGCCTGGACTGCCCGCCCGGCCACGAGCACGATGAAATCGGCGTGTTGGTGAACGTTGCCAACCAGCAGTTTGAAAACATGGAGACGGAGATCCAGCAAC GCCGCCACGCCGAAGATCGGCTGACCGAATACCTGGGGCAACTGGAAGACATCGTGTCCGCACGCACCCTGGAGCTCAAGGCCAGCAACCAGCGGCTGAG CCAGTCCAACGATGAATTGGAAGCGGCGAAGATCCACGCGCTTGGCATGGCCCAAGCACGGGCGGCATTCCTGGCCAACATGAGCCACGAAATCCGCACA CCGCTCAACGGCCTGCTGGGGATGATCGCGCTGTCACTCGACAGCCCACTCAACGCCGAGCAGCGTCAGCAACTGTCCATTGCCCATGACTCGGGCAAAG TGCTGGTGGAGTTGCTCAACGATATCCTCGACCTGTCCAAGTTCGACGCTGGCCAATTGGAGTTGGAGCGCATCCCGTTCGACCTGGGTTCTCTGGTGGA AGACACCGCGAACCTGTTGTCGCAGAACGCCGCGCCGAGCGTCGAACTGACGTGCCTGATCGACCCGCAGTTTCCCGCCCAGGTCCTGGGCGACCCGACC CGTGTGCGACAGATCGTCAGCAACCTGCTGTCCAACGCCCTCAAATTCACGCGCTTCGGACGGGTAGATGTTCGCCTCAGCGCGCGGGAGGGCCAGGTAC GCATCGAGGTCTGCGATACCGGCATCGGCATTGCGCAGGAAGCCCAGGTAAAGATCTTCCAGCCCTTCACCCAGGCCGGCGCCGGCATCACTCGCCAGTT CGGCGGCACGGGCCTGGGCCTGGCGCTGACGCACAACCTGTGTGAAGCCATGAAAGGCCGACTGAGCATCAGCTCGGAAGTGGGCTTCGGTAGCCAGTTC TGCGCCGACCTGCCGCTGCCAACCCATTTGCCCGCCGTCCAGCCACTGCCGCTCAAGGGTGAGGTCATCGCCATTACCCATGCCGGCAGCGGCCTCACCG AACTGCTTACCACCCTGCTGCCTCACTGGGGGCTGACACCCCGCTGCTACTCGCAAGACGATGACGTGAGCGGGCAAACCCCGGACCTGCTGATCACCGA CTGCCCGGAATGCCTGTTTCGCCTGCGCCCCACCCTCAGCGCGCCAATCTTGCTGGTGACCGCCTATGGCAACTTCATGCCCAGCGAGGAAGTCGCCGCA CTCGCGCCGCTGCAACAACAGGCGCGACCGCTGAGCCGCAATGCGCTGTATCAGATCCTGCACCGTAACCTGCGCAGCGACACGCAACTGATCCTCGACC CGATCCAGATGGAAACCGTGCCCCTGGCGCACAGGGCGCGCATCCTGCTGGTGGAGGACAATCCGGTCAACCAACTGGTGGCCAAGGGCATGCTCAGCAA ACTGGGATGTGAGGTGATCGTCGCAGCCCATGGTGGCGAGGCGCTCAAATTCCTTGAGGAACAACGCTTCGACCTGGTGTTGATGGACTGCAATATGCCG GTGATGGACGGCTACGAGGCCAGTCGGCAGATCCGTCGCAGCGGGCGCTGGCCGGACCTGCCGATCGTTGCCTTGACCGCCAACGCGCTCTCCGAAGAGC GCGAGCGTTGCCGGGCCGCGGGCATGAATGACTACCTGGCCAAGCCGTTCCGTCGTGAGGAACTCAGTGGTCTGCTTGAGCTGTGGGTGCCGAAGACGAC AACTCTCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
TCTGTCGAAGCAACTGGTCCAAGCCCGCGCGCAAGGCGTCAGCCTGGTTCAGGTCGATGCCGCTGTCGCACAGCAGCCGGGTCTTGAGGCCATGGGTCCG GTCACGCAGTCGCACACCGGTTTCGCTCAAGCTCAGGTGCACCTCCCGCTCATCCTTGGCGCTGCGCTGACGCTTGACCAGACTGAGTTGCTCAAGGCGC TTGAGCAGCGGCGTCAACGTGCCCGAATCCAGCATCAAGCGCTCCCCCAACGCCTTGACCGTGGGCTGCGCCGGCGCTGTGGCGTGCCACTCCCACAACA CCAGCATCACTAGGTATTGCGGGTAGGTCAGACCCAACTGATCGAGCATCGGCTTGTACGCGCGGGTCACCGCCCTGGAGGCGGCGTAAAGCTTGAAACA CAGTTGATTATCGAGCGCCAGGGAGACGGTCATTTGAGCAGGGCTTCGATCTCTTGGGTCAGGTGCTGCGGCTTGGTGGTCGGCGCAAAGCGCTTGACTA
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| Amino Acid Sequence |
>histidine kinase
MDIKFAHRLSYKQARLTVLVGFVLGTLLSLIQIGIDYASEDASINREIRSLIEISHNPASRIAYNIDAELAQELTLGLLHSPAIIHAQLIDNNGVVLADV DRPRKESTYRPVSDFLFGANRQFEDRLFLSHMPNESLGVLRLDVDTYAFGSRFLRRAEITLLNGFVRSLLLTGILLGLFYVMLTQPLVRIIRELSNRRQA RLDCPPGHEHDEIGVLVNVANQQFENMETEIQQRRHAEDRLTEYLGQLEDIVSARTLELKASNQRLSQSNDELEAAKIHALGMAQARAAFLANMSHEIRT PLNGLLGMIALSLDSPLNAEQRQQLSIAHDSGKVLVELLNDILDLSKFDAGQLELERIPFDLGSLVEDTANLLSQNAAPSVELTCLIDPQFPAQVLGDPT RVRQIVSNLLSNALKFTRFGRVDVRLSAREGQVRIEVCDTGIGIAQEAQVKIFQPFTQAGAGITRQFGGTGLGLALTHNLCEAMKGRLSISSEVGFGSQF CADLPLPTHLPAVQPLPLKGEVIAITHAGSGLTELLTTLLPHWGLTPRCYSQDDDVSGQTPDLLITDCPECLFRLRPTLSAPILLVTAYGNFMPSEEVAA LAPLQQQARPLSRNALYQILHRNLRSDTQLILDPIQMETVPLAHRARILLVEDNPVNQLVAKGMLSKLGCEVIVAAHGGEALKFLEEQRFDLVLMDCNMP VMDGYEASRQIRRSGRWPDLPIVALTANALSEERERCRAAGMNDYLAKPFRREELSGLLELWVPKTTTL
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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