Pseudomonas sp. 2-92, U367_RS0110455

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. 2-92(2010) strain 2-92 scaffold1.1, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
GCATCGGCTTGAACAAAACCATCTCGATCAGCATGGGCGAAGTGTCGATCAAGGACATGGGCACCGCCACCGCCCCCAAAGGCAACGGCACCCTGAGCGC CGAGAACTTTGACATGAAGATCAGCTGCAACGCCGGCACCAAGGTGGCGATGATCTTCGAACCGACCAAAGGCGCCGGCTCAGGCATCGTGACCGGCACC AAAGTGTTGAAGCTGATCGACGGCCTGGGCGCCGCCAAGAACATCGGTATCGCCCTGCTGGATGCCAATGGCGCACTGATCGACTTGAGCTCGCCGACCA CCGCGAAGATCGAGAACACCTTGCAGGACAGCAACACCACGCTGAAATTTTCGGCCGCCTACGTCACCACCATCGACGCTGCCTCTGCCGTGGCCGGTCG CGGCGATGCCACCCTGCCGTTCACCCTGCAGTACGAATAACCCCAACCCGATGCGGGGCCTGCGGGCCTCGCACACCTCTCGAACGTAGCGGTAGCCATT
DNA Sequence for Gene
>U367_RS0110455
ATGTTTCTTCGCCATTCACTGTCCCTGTGCGCGGGCCTGCTCGGCCTGCTTGCAGTCGGGCAAGCCACAGCCGGGATTTCGTTGAGCAGCACGCGTTTGG TGTTCGACGGCCAACACAAAGAAGCCGGAATCACCGTACGCAACAGCGGTGAGGACGTGTTGATCCAGTCCTGGGTCGACACGGACGCCGACGACGCGAC TTCGGTACCGTTTGCCGTCACCCCGCCGCTGGCGCGGGTCACCAGCAATGAGCAACAACTGTTGCGCGTGATCTATGAAGGCACGGGCATGCCCAGCGAC CGCGAGTCGGTCGTATGGCTCAACGTGCAGGAAATCCCCAAGGCCTCAAAAACCGAGAACACCTTGCAGCTTGCCGTGCGCCAGCGCATCAAGGTGTTCT TCCGCCCGCCCGCGTTGAAAAACAACGCCTACCTGGCGCCGACCGAGCTGCTCTGGCAGTTGGCCGAACACGCCGGTAAACGCGTGCTGCGGGTGAGCAA CCCGGGGGTTTATCACGTGTCGATTGCCGACATCACCCTGCAGGCCGGGGCCGTCAGCGAACATCCATTTGATTCGATGTTGATTGCGCCAGGCGAACAA AAAGAGTTCCAACTCAAGCAACTTTCCTCGATTAACTCCGCGCTCTTGAAGTTCAGCAGCATCAACGACTATGGCGCACAAGACCCTTATAGCGCGCAAC TTTCTGAGCGTGCTCAAACCAGCGCCAGTTTGAACAAAGAGTCGCCATAA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
CGCGCCTGCCGTTCGCGCAGCCGCACTTTCACTGTATTTCTCTTCGCTCCGTTAGTTCGTATCGGAGGTGATATAGGGTTCCTGCATGTTTTTATTCAAG CGCGATAGTCTGGCGCCATTTTTGATTGCCGTGGGCTTCAGTTCGGTCTGCCAGGCCGACGGCGATGAACAGTTCAATACGTCATTTTTGCAAGGCGCCG CAGCGTCGGTCGACCTGCAGTCATTGCTCGCCAGCAGCAGCGTACTCCCCGGCAATTACCGGGTTGACCTGTATGGCAACGACACCCTGGTGGGCCGACG CGATATCGACTTTCGCCGCAACCCTGTAAACGGCCGAGTCGAAGCCTGCCTGACCCTGGAGATGCTGCAACAAGTGGGCGTCGATATCGGCGCCTTGCAG TCCAGCGGCAAACTCGTCGACACCGATCCCAATGCCTGCCTCGACCTGCCTGCGCTGATCGAACACGCCAAAGTGCGCTACGACGTCCCGCGCCTGCGCC
Amino Acid Sequence
>pilus assembly protein
MFLRHSLSLCAGLLGLLAVGQATAGISLSSTRLVFDGQHKEAGITVRNSGEDVLIQSWVDTDADDATSVPFAVTPPLARVTSNEQQLLRVIYEGTGMPSD RESVVWLNVQEIPKASKTENTLQLAVRQRIKVFFRPPALKNNAYLAPTELLWQLAEHAGKRVLRVSNPGVYHVSIADITLQAGAVSEHPFDSMLIAPGEQ KEFQLKQLSSINSALLKFSSINDYGAQDPYSAQLSERAQTSASLNKESP
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site