Pseudomonas sp. 2-92, U367_RS0109995
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas sp. 2-92(2010) strain 2-92 scaffold1.1, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GCTGGCCCACGGTGTCTCGGCCGCTGCCCTCTTTATCCTGAGTGGCCAGTTGTACGAGCGCCTGCATACCCGTGACATGCGTGAAATGGGTGGTGTGTGG TCGCGCATCGCGTACCTGCCGGCGATCAGCCTGTTCTTCGCCGCCGCGTCCCTGGGCTTGCCGGGCACCGGCAACTTCATCGGCGAGTTCCTGATCCTGA TGGGTGCATTCGTGCAAACACCGTGGATCAGTGCGATTGCTACCTCCGGCCTGGTGTTTGGTTCGGTTTACTCGCTGATCATGATCCACCGCGCCTACTT CGGCCCGGCCAAGTCCGACACCGTCCTGCAAGGGATGGATGCTCGCGAACTGATCATGGTGCTCGGCCTTGCGGTGCTGCTGATCTACATCGGCGTGTAC CCGCAACCGTTCCTGGACACTTCTGCCGCGACGATGCATGGCGTGCAGCAGTGGTTCGGCACCGCCTTCTCTCAACTCGCTTCGGCCCGGTAAGAGCGCT
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| DNA Sequence for Gene |
>U367_RS0109995
ATGGAATTCACGATCCAACACTTTATCGCGCTTGCGCCGCTGCTGATTACCAGCCTCACCATCGTGGTGGTGATGCTGGCCATCGCCTGGCGCCGCAATC ATTCGCAAACGTTCCTGCTGTCCTGTGCCGGCCTCAACCTGGCCCTGCTGTCGATCATCCCGGCCCTCAAGGTCGCACCACTGGCGGTCACGCCGTTGAT GATGGTGGATGACTTCGCCCTGCTGTATATCGCGCTGATCCTGGTCGCGACCCTGGCATGCGTCACCCTCGCCCACGCCTATATGGGCGAAGGCGGCACC GGCTACCCAGGCAACAAGGAAGAGCTGTACCTGCTGATCCTGCTGGCTGCGGCCGGCGGTATCGTGCTGGTCAGCGCACAGCACCTGGCGGGCCTGTTCA TCGGCCTGGAACTGCTGTCGATCCCGACCTACGGCCTGGTGGCCTACGCCTTCTTCAACAAGCGCTCCCTGGAAGCCGGCATCAAGTACATGGTGCTGTC GGCCGCCGGTTCCGCGTTCCTGTTGTTCGGTATGGCCCTGCTCTACGCCGAAGCCGGCAGCCTGAGCTTCACCGGTATCGGTCACGCCCTGGCCACCACC AACATGCCTGCGCCAATCGCCCAACTGGGCCTGGCCATGATGTTGATCGGCCTGGCGTTCAAGCTGTCGCTGGTACCCTTCCACCTGTGGACCCCGGACG TGTACGAAGGCGCCCCGGCGCCGGTAGCGGCGTTCCTGGCCACCGCGTCGAAGGTTGCAGTGTTTGCGGTGATGGTGCGTCTGTTCCAGATCTCCCCTGC TGCCAACACCGGTGTGCTGAGCACCGTGCTGACCGTGATCGCCATCGCGTCGATCCTGTTCGGTAACCTGCTGGCCCTGACTCAGAACAACCTCAAGCGT CTGCTGGGTTACTCCTCCATCGCTCACTTCGGCTACCTGCTGATCGCCCTGGTGGCGAGCAAAGGCCTGGCCGTGGAAGCCATGGGTGTGTACCTGGTTA CCTACGTGATCACCAGCCTGGGTGCGTTCGGCGTGATCACGCTGATGTCCTCGCCGTTCAAAGGCCGTGATGCCGACGCCCTGTACGAATATCGCGGCCT GTTCTGGCGCCGTCCGTACCTGACCGCCGTACTGACCGTGATGATGCTGTCCCTGGCCGGTATCCCGTTGACTGCCGGCTTCATCGGCAAGTTCTACATC GTCGCCACCGGTGTCGAAGCCCACGAATGGTGGTTGGTTGCCTCCCTGGTACTGGGCAGCGCCATCGGCGTGTTCTACTACCTGCGCGTGATGGTCACCC TGTACCTGATCGAGCCAAACCTGCGCCGTGTGGATGCCGAGCTGCATTGGGAACAGAAGGCAGGCGGCGTGATGCTGCTGGCCATCGCCCTGCTCGCGTT CTTCCTGGGCGTGTACCCACAACCGTTGCTCACCCTGGTGCAGCACGCGGTGCTGGGCGTTTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
TCGCTTAGCGGGATGCAGTAAACAAGACGGCGCCTTCGGGCGCCGTTTTGCGTTTCAGGGGCAGGGGTTTTTACCCTCCCCTATTCACGGAAATTTCCTC GCCCGTCTGCCTCCCCATCCGGCATCTACCCGATTAACGCCGCCGTATGGTGTCTGCGTTTTAGGAAAGTTCCCACGGCAGGGTCACTTGACCCTTTGCG AGTGGGCCACCAAACTATACGCAGGCTACGTACAGAACATGGATGCTCTATTTATCGAACTGCCGGCCTTCGAGCGGCATCGCATGGACTATCTGAGTGA CGAGCTTTTCCAGGGTTTTCAACAAGAGTTGATGAAGAACCCGGAAGCAGGAGATGTGATCGAGGGAACAGGCGGACTGCGCAAAGTTCGCTTCATCGAT GAGCGACGCAACAAAGGCAAGCGCGGTGGCCTGCGGGTCATTTACTACTGGTGGTCGGGCGGCACGCAATTCTGGCTGTTCACCCTGTACGGCAAGCACG
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| Amino Acid Sequence |
>NADH:ubiquinone oxidoreductase subunit N
MEFTIQHFIALAPLLITSLTIVVVMLAIAWRRNHSQTFLLSCAGLNLALLSIIPALKVAPLAVTPLMMVDDFALLYIALILVATLACVTLAHAYMGEGGT GYPGNKEELYLLILLAAAGGIVLVSAQHLAGLFIGLELLSIPTYGLVAYAFFNKRSLEAGIKYMVLSAAGSAFLLFGMALLYAEAGSLSFTGIGHALATT NMPAPIAQLGLAMMLIGLAFKLSLVPFHLWTPDVYEGAPAPVAAFLATASKVAVFAVMVRLFQISPAANTGVLSTVLTVIAIASILFGNLLALTQNNLKR LLGYSSIAHFGYLLIALVASKGLAVEAMGVYLVTYVITSLGAFGVITLMSSPFKGRDADALYEYRGLFWRRPYLTAVLTVMMLSLAGIPLTAGFIGKFYI VATGVEAHEWWLVASLVLGSAIGVFYYLRVMVTLYLIEPNLRRVDAELHWEQKAGGVMLLAIALLAFFLGVYPQPLLTLVQHAVLGV
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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